Hb_001138_050

Information

Type -
Description -
Location Contig1138: 77099-79414
Sequence    

Annotation

kegg
ID rcu:RCOM_1621010
description Protein KTI12, putative
nr
ID KDP41289.1
description hypothetical protein JCGZ_15696 [Jatropha curcas]
swissprot
ID B9GAG9
description Protein KTI12 homolog OS=Oryza sativa subsp. japonica GN=KTI12 PE=3 SV=1
trembl
ID A0A067LB26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15696 PE=4 SV=1
Gene Ontology
ID GO:0005516
description protein kti12 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04128: 77269-79750
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001138_050 0.0 - - hypothetical protein JCGZ_15696 [Jatropha curcas]
2 Hb_000398_180 0.059446671 - - hypothetical protein PRUPE_ppa009665mg [Prunus persica]
3 Hb_000720_120 0.0602442195 - - PREDICTED: general transcription factor IIE subunit 2-like [Jatropha curcas]
4 Hb_001377_290 0.0606034628 - - PREDICTED: cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial [Jatropha curcas]
5 Hb_005357_030 0.0642401691 - - PREDICTED: pyruvate, phosphate dikinase regulatory protein 1, chloroplastic [Jatropha curcas]
6 Hb_001259_090 0.0664998965 - - hypothetical protein B456_005G056700 [Gossypium raimondii]
7 Hb_019253_020 0.0668403074 - - PREDICTED: uncharacterized protein LOC105647727 [Jatropha curcas]
8 Hb_004812_010 0.068605703 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD6 [Jatropha curcas]
9 Hb_004920_040 0.0699727979 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
10 Hb_004223_280 0.0711447536 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 6 [Jatropha curcas]
11 Hb_000613_140 0.071723765 - - PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic [Jatropha curcas]
12 Hb_006332_020 0.0733945217 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
13 Hb_003540_040 0.0738995739 - - hypothetical protein JCGZ_20979 [Jatropha curcas]
14 Hb_002007_060 0.0753483129 - - hypothetical protein JCGZ_23323 [Jatropha curcas]
15 Hb_000866_270 0.0753948978 - - PREDICTED: uncharacterized protein LOC105642993 [Jatropha curcas]
16 Hb_002762_060 0.0765251999 - - PREDICTED: diphthine methyltransferase homolog [Jatropha curcas]
17 Hb_000661_250 0.076647614 - - PREDICTED: RNA-binding protein 8A [Jatropha curcas]
18 Hb_011689_080 0.077903585 - - PREDICTED: uncharacterized protein LOC105631867 [Jatropha curcas]
19 Hb_023226_040 0.0781894407 - - PREDICTED: kxDL motif-containing protein 1 [Jatropha curcas]
20 Hb_000510_130 0.078615467 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]

Gene co-expression network

sample Hb_001138_050 Hb_001138_050 Hb_000398_180 Hb_000398_180 Hb_001138_050--Hb_000398_180 Hb_000720_120 Hb_000720_120 Hb_001138_050--Hb_000720_120 Hb_001377_290 Hb_001377_290 Hb_001138_050--Hb_001377_290 Hb_005357_030 Hb_005357_030 Hb_001138_050--Hb_005357_030 Hb_001259_090 Hb_001259_090 Hb_001138_050--Hb_001259_090 Hb_019253_020 Hb_019253_020 Hb_001138_050--Hb_019253_020 Hb_028872_140 Hb_028872_140 Hb_000398_180--Hb_028872_140 Hb_000398_180--Hb_001377_290 Hb_004195_160 Hb_004195_160 Hb_000398_180--Hb_004195_160 Hb_011689_080 Hb_011689_080 Hb_000398_180--Hb_011689_080 Hb_006332_020 Hb_006332_020 Hb_000398_180--Hb_006332_020 Hb_007380_070 Hb_007380_070 Hb_000398_180--Hb_007380_070 Hb_000169_010 Hb_000169_010 Hb_000720_120--Hb_000169_010 Hb_003392_040 Hb_003392_040 Hb_000720_120--Hb_003392_040 Hb_000613_140 Hb_000613_140 Hb_000720_120--Hb_000613_140 Hb_000638_080 Hb_000638_080 Hb_000720_120--Hb_000638_080 Hb_000032_570 Hb_000032_570 Hb_000720_120--Hb_000032_570 Hb_001377_290--Hb_011689_080 Hb_001377_290--Hb_003392_040 Hb_001377_290--Hb_004195_160 Hb_002078_150 Hb_002078_150 Hb_001377_290--Hb_002078_150 Hb_004223_280 Hb_004223_280 Hb_005357_030--Hb_004223_280 Hb_002685_170 Hb_002685_170 Hb_005357_030--Hb_002685_170 Hb_007590_050 Hb_007590_050 Hb_005357_030--Hb_007590_050 Hb_005357_030--Hb_019253_020 Hb_001226_160 Hb_001226_160 Hb_005357_030--Hb_001226_160 Hb_000661_250 Hb_000661_250 Hb_001259_090--Hb_000661_250 Hb_000866_270 Hb_000866_270 Hb_001259_090--Hb_000866_270 Hb_096563_010 Hb_096563_010 Hb_001259_090--Hb_096563_010 Hb_002007_060 Hb_002007_060 Hb_001259_090--Hb_002007_060 Hb_000059_330 Hb_000059_330 Hb_001259_090--Hb_000059_330 Hb_000656_400 Hb_000656_400 Hb_001259_090--Hb_000656_400 Hb_019253_020--Hb_000656_400 Hb_000251_130 Hb_000251_130 Hb_019253_020--Hb_000251_130 Hb_019253_020--Hb_000613_140 Hb_019253_020--Hb_006332_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.1687 20.8005 9.37301 14.275 34.1435 36.903
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.8179 47.2381 32.8497 16.5177 10.4205

CAGE analysis