Hb_000251_130

Information

Type -
Description -
Location Contig251: 171552-175197
Sequence    

Annotation

kegg
ID tcc:TCM_029534
description UDP-N-acetylglucosamine transferase subunit ALG14 isoform 1
nr
ID XP_012085407.1
description PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
swissprot
ID Q6CF02
description UDP-N-acetylglucosamine transferase subunit ALG14 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG14 PE=3 SV=1
trembl
ID A0A061GF46
description UDP-N-acetylglucosamine transferase subunit ALG14 isoform 1 OS=Theobroma cacao GN=TCM_029534 PE=4 SV=1
Gene Ontology
ID GO:0016740
description udp-n-acetylglucosamine transferase subunit alg14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26231: 172258-175251 , PASA_asmbl_26232: 95186-175251 , PASA_asmbl_26237: 172254-175203 , PASA_asmbl_26240: 172254-175203 , PASA_asmbl_26248: 175255-175396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000251_130 0.0 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
2 Hb_001226_160 0.0671682974 - - PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1 [Jatropha curcas]
3 Hb_000656_400 0.0701103649 - - PREDICTED: transcription initiation factor TFIID subunit 9 [Jatropha curcas]
4 Hb_002183_090 0.0702842094 - - PREDICTED: protein EMSY-LIKE 1 [Jatropha curcas]
5 Hb_005357_030 0.070977079 - - PREDICTED: pyruvate, phosphate dikinase regulatory protein 1, chloroplastic [Jatropha curcas]
6 Hb_172632_090 0.0716674515 - - ribosomal pseudouridine synthase, putative [Ricinus communis]
7 Hb_019253_020 0.0737915419 - - PREDICTED: uncharacterized protein LOC105647727 [Jatropha curcas]
8 Hb_003126_080 0.0743558877 - - PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
9 Hb_001766_110 0.0751245483 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Jatropha curcas]
10 Hb_000384_100 0.0775847589 - - hydrolase, putative [Ricinus communis]
11 Hb_000085_050 0.0793743126 - - PREDICTED: grpE protein homolog, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_002311_350 0.080791051 - - PREDICTED: 60S ribosomal protein L19-3 [Jatropha curcas]
13 Hb_033834_040 0.080812765 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002226_070 0.0833604682 - - PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas]
15 Hb_002963_010 0.0838596179 - - PREDICTED: autophagy-related protein 18b-like isoform X1 [Jatropha curcas]
16 Hb_000732_130 0.0839266071 transcription factor TF Family: HSF hypothetical protein JCGZ_17108 [Jatropha curcas]
17 Hb_005618_140 0.0849170375 - - PREDICTED: uncharacterized protein LOC105642706 [Jatropha curcas]
18 Hb_004223_280 0.0853911123 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 6 [Jatropha curcas]
19 Hb_005463_040 0.0869728976 - - signal transducer, putative [Ricinus communis]
20 Hb_159809_020 0.087150388 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000251_130 Hb_000251_130 Hb_001226_160 Hb_001226_160 Hb_000251_130--Hb_001226_160 Hb_000656_400 Hb_000656_400 Hb_000251_130--Hb_000656_400 Hb_002183_090 Hb_002183_090 Hb_000251_130--Hb_002183_090 Hb_005357_030 Hb_005357_030 Hb_000251_130--Hb_005357_030 Hb_172632_090 Hb_172632_090 Hb_000251_130--Hb_172632_090 Hb_019253_020 Hb_019253_020 Hb_000251_130--Hb_019253_020 Hb_001226_160--Hb_000656_400 Hb_000056_200 Hb_000056_200 Hb_001226_160--Hb_000056_200 Hb_002660_080 Hb_002660_080 Hb_001226_160--Hb_002660_080 Hb_096563_010 Hb_096563_010 Hb_001226_160--Hb_096563_010 Hb_002226_070 Hb_002226_070 Hb_001226_160--Hb_002226_070 Hb_003615_010 Hb_003615_010 Hb_001226_160--Hb_003615_010 Hb_003126_080 Hb_003126_080 Hb_000656_400--Hb_003126_080 Hb_000920_180 Hb_000920_180 Hb_000656_400--Hb_000920_180 Hb_118707_030 Hb_118707_030 Hb_000656_400--Hb_118707_030 Hb_001259_090 Hb_001259_090 Hb_000656_400--Hb_001259_090 Hb_001766_110 Hb_001766_110 Hb_000656_400--Hb_001766_110 Hb_000085_050 Hb_000085_050 Hb_002183_090--Hb_000085_050 Hb_000976_170 Hb_000976_170 Hb_002183_090--Hb_000976_170 Hb_000384_100 Hb_000384_100 Hb_002183_090--Hb_000384_100 Hb_033834_040 Hb_033834_040 Hb_002183_090--Hb_033834_040 Hb_002044_080 Hb_002044_080 Hb_002183_090--Hb_002044_080 Hb_004223_280 Hb_004223_280 Hb_005357_030--Hb_004223_280 Hb_002685_170 Hb_002685_170 Hb_005357_030--Hb_002685_170 Hb_007590_050 Hb_007590_050 Hb_005357_030--Hb_007590_050 Hb_001138_050 Hb_001138_050 Hb_005357_030--Hb_001138_050 Hb_005357_030--Hb_019253_020 Hb_005357_030--Hb_001226_160 Hb_172632_090--Hb_003126_080 Hb_172632_090--Hb_003615_010 Hb_005993_040 Hb_005993_040 Hb_172632_090--Hb_005993_040 Hb_172632_090--Hb_001226_160 Hb_002311_350 Hb_002311_350 Hb_172632_090--Hb_002311_350 Hb_019253_020--Hb_001138_050 Hb_019253_020--Hb_000656_400 Hb_000613_140 Hb_000613_140 Hb_019253_020--Hb_000613_140 Hb_006332_020 Hb_006332_020 Hb_019253_020--Hb_006332_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.9209 12.2272 5.73956 7.01261 16.9075 19.7243
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.3614 36.8856 20.6074 15.1424 8.66523

CAGE analysis