Hb_000941_070

Information

Type -
Description -
Location Contig941: 84862-85549
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000941_070 0.0 - - -
2 Hb_080477_050 0.1819023002 - - hypothetical protein M569_16374 [Genlisea aurea]
3 Hb_002609_220 0.1911184691 - - Leucine-rich repeat protein kinase family protein, putative [Theobroma cacao]
4 Hb_000733_030 0.1944232966 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
5 Hb_000165_010 0.2007466721 - - hypothetical protein POPTR_0010s19120g [Populus trichocarpa]
6 Hb_001437_240 0.2019123252 - - -
7 Hb_012366_020 0.2031852909 - - unnamed protein product [Vitis vinifera]
8 Hb_000116_470 0.2032735974 - - PREDICTED: AT-hook motif nuclear-localized protein 10-like [Jatropha curcas]
9 Hb_002936_050 0.20687754 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR18 isoform X2 [Jatropha curcas]
10 Hb_004882_020 0.2073597429 - - -
11 Hb_002307_090 0.2097470308 - - magnesium transporter CorA-like family protein [Populus trichocarpa]
12 Hb_000003_840 0.2138272471 - - multidrug/pheromone exporter protein [Hevea brasiliensis]
13 Hb_002725_130 0.2139171964 - - Osmotic avoidance abnormal protein, putative [Ricinus communis]
14 Hb_002897_060 0.2144072819 - - PREDICTED: uncharacterized protein LOC105649233 [Jatropha curcas]
15 Hb_169325_010 0.2149951781 - - PREDICTED: uncharacterized protein LOC103699787, partial [Phoenix dactylifera]
16 Hb_009812_020 0.2193025477 - - -
17 Hb_007229_060 0.22010677 - - PREDICTED: pentatricopeptide repeat-containing protein At2g44880 [Jatropha curcas]
18 Hb_001232_130 0.2219005007 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
19 Hb_000934_030 0.2221625171 - - -
20 Hb_001366_200 0.2229024428 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000941_070 Hb_000941_070 Hb_080477_050 Hb_080477_050 Hb_000941_070--Hb_080477_050 Hb_002609_220 Hb_002609_220 Hb_000941_070--Hb_002609_220 Hb_000733_030 Hb_000733_030 Hb_000941_070--Hb_000733_030 Hb_000165_010 Hb_000165_010 Hb_000941_070--Hb_000165_010 Hb_001437_240 Hb_001437_240 Hb_000941_070--Hb_001437_240 Hb_012366_020 Hb_012366_020 Hb_000941_070--Hb_012366_020 Hb_000419_040 Hb_000419_040 Hb_080477_050--Hb_000419_040 Hb_002936_050 Hb_002936_050 Hb_080477_050--Hb_002936_050 Hb_000003_840 Hb_000003_840 Hb_080477_050--Hb_000003_840 Hb_002897_060 Hb_002897_060 Hb_080477_050--Hb_002897_060 Hb_012573_030 Hb_012573_030 Hb_080477_050--Hb_012573_030 Hb_054865_130 Hb_054865_130 Hb_080477_050--Hb_054865_130 Hb_005532_060 Hb_005532_060 Hb_002609_220--Hb_005532_060 Hb_004324_370 Hb_004324_370 Hb_002609_220--Hb_004324_370 Hb_000223_150 Hb_000223_150 Hb_002609_220--Hb_000223_150 Hb_006501_040 Hb_006501_040 Hb_002609_220--Hb_006501_040 Hb_001009_310 Hb_001009_310 Hb_002609_220--Hb_001009_310 Hb_178968_110 Hb_178968_110 Hb_002609_220--Hb_178968_110 Hb_001349_010 Hb_001349_010 Hb_000733_030--Hb_001349_010 Hb_004650_070 Hb_004650_070 Hb_000733_030--Hb_004650_070 Hb_025087_010 Hb_025087_010 Hb_000733_030--Hb_025087_010 Hb_005000_290 Hb_005000_290 Hb_000733_030--Hb_005000_290 Hb_000809_050 Hb_000809_050 Hb_000733_030--Hb_000809_050 Hb_000733_030--Hb_002897_060 Hb_003504_020 Hb_003504_020 Hb_000165_010--Hb_003504_020 Hb_002053_060 Hb_002053_060 Hb_000165_010--Hb_002053_060 Hb_001232_130 Hb_001232_130 Hb_000165_010--Hb_001232_130 Hb_019654_090 Hb_019654_090 Hb_000165_010--Hb_019654_090 Hb_002027_400 Hb_002027_400 Hb_000165_010--Hb_002027_400 Hb_007429_030 Hb_007429_030 Hb_000165_010--Hb_007429_030 Hb_004882_020 Hb_004882_020 Hb_001437_240--Hb_004882_020 Hb_183612_100 Hb_183612_100 Hb_001437_240--Hb_183612_100 Hb_143629_090 Hb_143629_090 Hb_001437_240--Hb_143629_090 Hb_002307_090 Hb_002307_090 Hb_001437_240--Hb_002307_090 Hb_001437_240--Hb_002936_050 Hb_004800_160 Hb_004800_160 Hb_001437_240--Hb_004800_160 Hb_002260_090 Hb_002260_090 Hb_012366_020--Hb_002260_090 Hb_030765_020 Hb_030765_020 Hb_012366_020--Hb_030765_020 Hb_012366_020--Hb_000003_840 Hb_012366_020--Hb_002936_050 Hb_000836_500 Hb_000836_500 Hb_012366_020--Hb_000836_500 Hb_000178_110 Hb_000178_110 Hb_012366_020--Hb_000178_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.40953 0.892018 0 0 1.04174 0.858987
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.50344 1.72305 2.54113 0 0.395652

CAGE analysis