Hb_000920_060

Information

Type -
Description -
Location Contig920: 32494-49465
Sequence    

Annotation

kegg
ID pop:POPTR_0003s20020g
description POPTRDRAFT_555007; hypothetical protein
nr
ID XP_012068619.1
description PREDICTED: intron-binding protein aquarius [Jatropha curcas]
swissprot
ID O60306
description Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4
trembl
ID A0A067L8R6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24503 PE=4 SV=1
Gene Ontology
ID GO:0043231
description intron-binding protein aquarius

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_060 0.0 - - PREDICTED: intron-binding protein aquarius [Jatropha curcas]
2 Hb_000926_190 0.0684266555 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
3 Hb_007054_060 0.0740540124 - - -
4 Hb_023386_020 0.0771493993 - - PREDICTED: chaperone protein dnaJ 13 isoform X2 [Jatropha curcas]
5 Hb_000160_210 0.0774027205 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000291_050 0.0790519059 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105638874 isoform X1 [Jatropha curcas]
7 Hb_000827_070 0.0794391808 desease resistance Gene Name: NB-ARC PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
8 Hb_004155_010 0.0812963686 - - PREDICTED: la protein 1 [Jatropha curcas]
9 Hb_005779_080 0.0842513385 - - PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Jatropha curcas]
10 Hb_004100_080 0.085392639 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005496_130 0.0865433266 - - PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Jatropha curcas]
12 Hb_001638_270 0.0866224175 - - PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Jatropha curcas]
13 Hb_000502_050 0.0892909679 transcription factor TF Family: HSF Heat shock factor protein HSF8, putative [Ricinus communis]
14 Hb_045793_010 0.0898439137 - - PREDICTED: putative disease resistance protein RGA3 [Pyrus x bretschneideri]
15 Hb_000856_110 0.0907261294 - - PREDICTED: uncharacterized protein LOC105640477 isoform X2 [Jatropha curcas]
16 Hb_001258_090 0.0913182762 - - PREDICTED: protein spt2-like [Jatropha curcas]
17 Hb_000836_440 0.0916323565 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_002205_040 0.0920385578 - - nucleic acid binding protein, putative [Ricinus communis]
19 Hb_000029_050 0.092391283 - - expressed protein, putative [Ricinus communis]
20 Hb_003878_070 0.0924966848 - - PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000920_060 Hb_000920_060 Hb_000926_190 Hb_000926_190 Hb_000920_060--Hb_000926_190 Hb_007054_060 Hb_007054_060 Hb_000920_060--Hb_007054_060 Hb_023386_020 Hb_023386_020 Hb_000920_060--Hb_023386_020 Hb_000160_210 Hb_000160_210 Hb_000920_060--Hb_000160_210 Hb_000291_050 Hb_000291_050 Hb_000920_060--Hb_000291_050 Hb_000827_070 Hb_000827_070 Hb_000920_060--Hb_000827_070 Hb_000926_190--Hb_023386_020 Hb_023386_040 Hb_023386_040 Hb_000926_190--Hb_023386_040 Hb_000926_190--Hb_007054_060 Hb_000334_270 Hb_000334_270 Hb_000926_190--Hb_000334_270 Hb_000794_050 Hb_000794_050 Hb_000926_190--Hb_000794_050 Hb_000879_200 Hb_000879_200 Hb_000926_190--Hb_000879_200 Hb_003878_070 Hb_003878_070 Hb_007054_060--Hb_003878_070 Hb_001258_090 Hb_001258_090 Hb_007054_060--Hb_001258_090 Hb_007054_060--Hb_023386_040 Hb_000179_030 Hb_000179_030 Hb_007054_060--Hb_000179_030 Hb_007054_060--Hb_023386_020 Hb_004100_080 Hb_004100_080 Hb_023386_020--Hb_004100_080 Hb_002518_280 Hb_002518_280 Hb_023386_020--Hb_002518_280 Hb_033720_010 Hb_033720_010 Hb_023386_020--Hb_033720_010 Hb_156973_010 Hb_156973_010 Hb_023386_020--Hb_156973_010 Hb_023386_020--Hb_000879_200 Hb_007007_060 Hb_007007_060 Hb_000160_210--Hb_007007_060 Hb_003794_010 Hb_003794_010 Hb_000160_210--Hb_003794_010 Hb_000160_210--Hb_004100_080 Hb_000160_210--Hb_023386_020 Hb_000009_090 Hb_000009_090 Hb_000160_210--Hb_000009_090 Hb_079526_030 Hb_079526_030 Hb_000160_210--Hb_079526_030 Hb_002725_120 Hb_002725_120 Hb_000291_050--Hb_002725_120 Hb_005779_080 Hb_005779_080 Hb_000291_050--Hb_005779_080 Hb_000165_250 Hb_000165_250 Hb_000291_050--Hb_000165_250 Hb_006649_050 Hb_006649_050 Hb_000291_050--Hb_006649_050 Hb_005496_130 Hb_005496_130 Hb_000291_050--Hb_005496_130 Hb_001004_060 Hb_001004_060 Hb_000291_050--Hb_001004_060 Hb_005188_050 Hb_005188_050 Hb_000827_070--Hb_005188_050 Hb_045793_010 Hb_045793_010 Hb_000827_070--Hb_045793_010 Hb_000487_290 Hb_000487_290 Hb_000827_070--Hb_000487_290 Hb_002477_030 Hb_002477_030 Hb_000827_070--Hb_002477_030 Hb_120327_010 Hb_120327_010 Hb_000827_070--Hb_120327_010 Hb_001736_040 Hb_001736_040 Hb_000827_070--Hb_001736_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.43735 4.60522 2.41587 1.28537 4.74797 5.21248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.42875 4.73356 3.19544 3.04793 4.20375

CAGE analysis