Hb_000768_060

Information

Type -
Description -
Location Contig768: 50759-59102
Sequence    

Annotation

kegg
ID pop:POPTR_0013s06510g
description POPTRDRAFT_571307; hypothetical protein
nr
ID XP_012070334.1
description PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02637 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57493: 50201-55159 , PASA_asmbl_57494: 54318-54512 , PASA_asmbl_57498: 59054-59214
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000768_060 0.0 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
2 Hb_001609_010 0.1220801973 desease resistance Gene Name: NB-ARC PREDICTED: putative inactive disease susceptibility protein LOV1 [Jatropha curcas]
3 Hb_001322_210 0.1333109096 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Jatropha curcas]
4 Hb_000236_250 0.1356383554 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001871_040 0.1361982185 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 1-like isoform X2 [Jatropha curcas]
6 Hb_011318_010 0.1363554796 - - PREDICTED: peroxisome biogenesis protein 5 [Jatropha curcas]
7 Hb_017075_010 0.137314136 transcription factor TF Family: SNF2 PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 [Jatropha curcas]
8 Hb_000915_050 0.13755149 - - conserved hypothetical protein [Ricinus communis]
9 Hb_011030_010 0.1386675996 desease resistance Gene Name: RLI ABC transporter family protein [Hevea brasiliensis]
10 Hb_123777_030 0.1420286972 transcription factor TF Family: SNF2 PREDICTED: DNA helicase INO80 isoform X2 [Jatropha curcas]
11 Hb_001040_160 0.142807643 - - glutaredoxin, grx, putative [Ricinus communis]
12 Hb_004619_050 0.1433055483 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 8-like isoform X2 [Jatropha curcas]
13 Hb_004452_100 0.1445585074 - - PREDICTED: uncharacterized protein LOC105639563 [Jatropha curcas]
14 Hb_000005_380 0.1448357901 - - PREDICTED: uncharacterized protein LOC105634023 isoform X1 [Jatropha curcas]
15 Hb_003363_010 0.1448869576 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000077_090 0.1451262425 - - conserved hypothetical protein [Ricinus communis]
17 Hb_013405_050 0.1461368038 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
18 Hb_007586_030 0.1463345209 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]
19 Hb_000780_220 0.1466388075 transcription factor TF Family: GRAS PREDICTED: scarecrow-like transcription factor PAT1 [Jatropha curcas]
20 Hb_000031_030 0.1468539385 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000768_060 Hb_000768_060 Hb_001609_010 Hb_001609_010 Hb_000768_060--Hb_001609_010 Hb_001322_210 Hb_001322_210 Hb_000768_060--Hb_001322_210 Hb_000236_250 Hb_000236_250 Hb_000768_060--Hb_000236_250 Hb_001871_040 Hb_001871_040 Hb_000768_060--Hb_001871_040 Hb_011318_010 Hb_011318_010 Hb_000768_060--Hb_011318_010 Hb_017075_010 Hb_017075_010 Hb_000768_060--Hb_017075_010 Hb_063047_010 Hb_063047_010 Hb_001609_010--Hb_063047_010 Hb_001040_160 Hb_001040_160 Hb_001609_010--Hb_001040_160 Hb_000316_030 Hb_000316_030 Hb_001609_010--Hb_000316_030 Hb_001609_010--Hb_001871_040 Hb_004881_050 Hb_004881_050 Hb_001609_010--Hb_004881_050 Hb_000457_060 Hb_000457_060 Hb_001609_010--Hb_000457_060 Hb_000780_220 Hb_000780_220 Hb_001322_210--Hb_000780_220 Hb_002291_070 Hb_002291_070 Hb_001322_210--Hb_002291_070 Hb_003216_080 Hb_003216_080 Hb_001322_210--Hb_003216_080 Hb_002471_210 Hb_002471_210 Hb_001322_210--Hb_002471_210 Hb_000347_130 Hb_000347_130 Hb_001322_210--Hb_000347_130 Hb_007849_020 Hb_007849_020 Hb_001322_210--Hb_007849_020 Hb_001584_110 Hb_001584_110 Hb_000236_250--Hb_001584_110 Hb_014568_030 Hb_014568_030 Hb_000236_250--Hb_014568_030 Hb_005280_010 Hb_005280_010 Hb_000236_250--Hb_005280_010 Hb_002890_340 Hb_002890_340 Hb_000236_250--Hb_002890_340 Hb_185467_020 Hb_185467_020 Hb_000236_250--Hb_185467_020 Hb_001017_040 Hb_001017_040 Hb_000236_250--Hb_001017_040 Hb_123777_030 Hb_123777_030 Hb_001871_040--Hb_123777_030 Hb_004055_040 Hb_004055_040 Hb_001871_040--Hb_004055_040 Hb_004096_020 Hb_004096_020 Hb_001871_040--Hb_004096_020 Hb_001871_040--Hb_063047_010 Hb_003406_040 Hb_003406_040 Hb_001871_040--Hb_003406_040 Hb_002928_060 Hb_002928_060 Hb_001871_040--Hb_002928_060 Hb_004452_100 Hb_004452_100 Hb_011318_010--Hb_004452_100 Hb_000005_380 Hb_000005_380 Hb_011318_010--Hb_000005_380 Hb_002798_040 Hb_002798_040 Hb_011318_010--Hb_002798_040 Hb_090804_010 Hb_090804_010 Hb_011318_010--Hb_090804_010 Hb_000244_250 Hb_000244_250 Hb_011318_010--Hb_000244_250 Hb_002054_040 Hb_002054_040 Hb_011318_010--Hb_002054_040 Hb_017075_010--Hb_001322_210 Hb_017075_010--Hb_002291_070 Hb_000627_080 Hb_000627_080 Hb_017075_010--Hb_000627_080 Hb_017075_010--Hb_000780_220 Hb_017075_010--Hb_007849_020 Hb_000390_070 Hb_000390_070 Hb_017075_010--Hb_000390_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.8952 9.21736 1.62244 9.17116 13.13 30.768
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.81133 4.53585 18.5795 5.03059 9.53124

CAGE analysis