Hb_000683_010

Information

Type -
Description -
Location Contig683: 8815-10524
Sequence    

Annotation

kegg
ID rcu:RCOM_0811450
description Interleukin-1 receptor-associated kinase, putative (EC:1.3.1.74)
nr
ID XP_002518685.1
description Interleukin-1 receptor-associated kinase, putative [Ricinus communis]
swissprot
ID Q94C77
description Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1
trembl
ID B9RYA1
description Interleukin-1 receptor-associated kinase, putative OS=Ricinus communis GN=RCOM_0811450 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor protein kinase-like protein at4g34220

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000683_010 0.0 - - Interleukin-1 receptor-associated kinase, putative [Ricinus communis]
2 Hb_000422_020 0.0961320395 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
3 Hb_008768_010 0.1147950349 - - PREDICTED: equilibrative nucleotide transporter 8 isoform X1 [Jatropha curcas]
4 Hb_011282_070 0.1215514358 - - ATP binding protein, putative [Ricinus communis]
5 Hb_020332_040 0.1281498694 - - PREDICTED: alcohol dehydrogenase 1-like [Jatropha curcas]
6 Hb_027141_010 0.1299355843 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
7 Hb_003900_050 0.1311345143 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]
8 Hb_001218_070 0.1332190278 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
9 Hb_175968_010 0.1340125268 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
10 Hb_002048_010 0.1363369905 - - unknown [Lotus japonicus]
11 Hb_000438_190 0.1377475941 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
12 Hb_000907_190 0.1392932085 - - PREDICTED: uncharacterized protein At4g15970-like [Jatropha curcas]
13 Hb_000205_210 0.1413102835 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like isoform X1 [Citrus sinensis]
14 Hb_004463_040 0.1423414703 - - -
15 Hb_000380_130 0.1437186469 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
16 Hb_004881_060 0.1443279831 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
17 Hb_109673_010 0.146293271 - - glutathione s-transferase, putative [Ricinus communis]
18 Hb_001104_210 0.146574041 - - hypothetical protein JCGZ_23620 [Jatropha curcas]
19 Hb_011486_030 0.1472545614 - - branched-chain amino acid aminotransferase, putative [Ricinus communis]
20 Hb_033363_080 0.1475672438 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000683_010 Hb_000683_010 Hb_000422_020 Hb_000422_020 Hb_000683_010--Hb_000422_020 Hb_008768_010 Hb_008768_010 Hb_000683_010--Hb_008768_010 Hb_011282_070 Hb_011282_070 Hb_000683_010--Hb_011282_070 Hb_020332_040 Hb_020332_040 Hb_000683_010--Hb_020332_040 Hb_027141_010 Hb_027141_010 Hb_000683_010--Hb_027141_010 Hb_003900_050 Hb_003900_050 Hb_000683_010--Hb_003900_050 Hb_000575_110 Hb_000575_110 Hb_000422_020--Hb_000575_110 Hb_000422_020--Hb_008768_010 Hb_000422_020--Hb_003900_050 Hb_056101_010 Hb_056101_010 Hb_000422_020--Hb_056101_010 Hb_025526_010 Hb_025526_010 Hb_000422_020--Hb_025526_010 Hb_004881_060 Hb_004881_060 Hb_008768_010--Hb_004881_060 Hb_008768_010--Hb_025526_010 Hb_000205_210 Hb_000205_210 Hb_008768_010--Hb_000205_210 Hb_011671_420 Hb_011671_420 Hb_008768_010--Hb_011671_420 Hb_021419_060 Hb_021419_060 Hb_011282_070--Hb_021419_060 Hb_004463_040 Hb_004463_040 Hb_011282_070--Hb_004463_040 Hb_002048_010 Hb_002048_010 Hb_011282_070--Hb_002048_010 Hb_011282_070--Hb_020332_040 Hb_011282_070--Hb_000422_020 Hb_012660_010 Hb_012660_010 Hb_020332_040--Hb_012660_010 Hb_000189_260 Hb_000189_260 Hb_020332_040--Hb_000189_260 Hb_020332_040--Hb_002048_010 Hb_011486_030 Hb_011486_030 Hb_020332_040--Hb_011486_030 Hb_020332_040--Hb_027141_010 Hb_000976_020 Hb_000976_020 Hb_020332_040--Hb_000976_020 Hb_000140_260 Hb_000140_260 Hb_027141_010--Hb_000140_260 Hb_076895_020 Hb_076895_020 Hb_027141_010--Hb_076895_020 Hb_004200_040 Hb_004200_040 Hb_027141_010--Hb_004200_040 Hb_000539_080 Hb_000539_080 Hb_027141_010--Hb_000539_080 Hb_027141_010--Hb_000205_210 Hb_003900_050--Hb_004200_040 Hb_003900_050--Hb_004463_040 Hb_003900_050--Hb_000205_210 Hb_003900_050--Hb_000140_260 Hb_003900_050--Hb_004881_060 Hb_000684_020 Hb_000684_020 Hb_003900_050--Hb_000684_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10027 1.20888 0.41456 1.25805 0.0118395 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 14.4865 1.86867

CAGE analysis