Hb_000661_290

Information

Type -
Description -
Location Contig661: 332236-350481
Sequence    

Annotation

kegg
ID rcu:RCOM_1578630
description poly(p)/ATP NAD kinase, putative (EC:2.7.1.86)
nr
ID XP_011032050.1
description PREDICTED: NAD(H) kinase 1-like isoform X1 [Populus euphratica]
swissprot
ID Q56YN3
description NAD(H) kinase 1 OS=Arabidopsis thaliana GN=NADK1 PE=1 SV=2
trembl
ID B9RIE7
description Poly(P)/ATP NAD kinase, putative OS=Ricinus communis GN=RCOM_1578630 PE=3 SV=1
Gene Ontology
ID GO:0003951
description nad kinase 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53010: 332433-350519 , PASA_asmbl_53011: 332433-350519
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_290 0.0 - - PREDICTED: NAD(H) kinase 1-like isoform X1 [Populus euphratica]
2 Hb_000521_320 0.0712462295 - - hypothetical protein POPTR_0001s23520g [Populus trichocarpa]
3 Hb_006816_350 0.073235565 - - PREDICTED: syntaxin-43 [Jatropha curcas]
4 Hb_000868_110 0.0758166609 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
5 Hb_002671_140 0.0797850169 - - calcium-dependent protein kinase [Hevea brasiliensis]
6 Hb_004586_140 0.0802465359 - - PREDICTED: uncharacterized protein LOC105630689 [Jatropha curcas]
7 Hb_013399_100 0.0821136006 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000818_010 0.0829256341 - - Calmodulin-domain protein kinase 5 isoform 1 [Theobroma cacao]
9 Hb_005016_160 0.0839678016 - - PREDICTED: transcription initiation factor TFIID subunit 8 [Jatropha curcas]
10 Hb_011995_010 0.0841718333 - - dc50, putative [Ricinus communis]
11 Hb_000179_070 0.0856674828 - - hypothetical protein CICLE_v10009411mg [Citrus clementina]
12 Hb_000010_400 0.087061716 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
13 Hb_000302_270 0.0872882864 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
14 Hb_095296_010 0.0886070391 - - PREDICTED: syntaxin-32 [Jatropha curcas]
15 Hb_002872_030 0.089448964 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
16 Hb_000331_670 0.0905300228 - - PREDICTED: protein tipD [Jatropha curcas]
17 Hb_000915_180 0.0906555789 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Pyrus x bretschneideri]
18 Hb_002073_200 0.0914696345 - - Phosphatase 2A-2 [Theobroma cacao]
19 Hb_029799_010 0.0915401398 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_003020_270 0.0916263297 - - PREDICTED: ras-related protein Rab2BV [Jatropha curcas]

Gene co-expression network

sample Hb_000661_290 Hb_000661_290 Hb_000521_320 Hb_000521_320 Hb_000661_290--Hb_000521_320 Hb_006816_350 Hb_006816_350 Hb_000661_290--Hb_006816_350 Hb_000868_110 Hb_000868_110 Hb_000661_290--Hb_000868_110 Hb_002671_140 Hb_002671_140 Hb_000661_290--Hb_002671_140 Hb_004586_140 Hb_004586_140 Hb_000661_290--Hb_004586_140 Hb_013399_100 Hb_013399_100 Hb_000661_290--Hb_013399_100 Hb_000302_270 Hb_000302_270 Hb_000521_320--Hb_000302_270 Hb_000010_400 Hb_000010_400 Hb_000521_320--Hb_000010_400 Hb_004678_040 Hb_004678_040 Hb_000521_320--Hb_004678_040 Hb_002950_100 Hb_002950_100 Hb_000521_320--Hb_002950_100 Hb_011995_010 Hb_011995_010 Hb_000521_320--Hb_011995_010 Hb_025645_010 Hb_025645_010 Hb_000521_320--Hb_025645_010 Hb_095296_010 Hb_095296_010 Hb_006816_350--Hb_095296_010 Hb_003020_270 Hb_003020_270 Hb_006816_350--Hb_003020_270 Hb_000357_110 Hb_000357_110 Hb_006816_350--Hb_000357_110 Hb_006816_350--Hb_000868_110 Hb_000179_070 Hb_000179_070 Hb_006816_350--Hb_000179_070 Hb_000868_110--Hb_095296_010 Hb_002073_200 Hb_002073_200 Hb_000868_110--Hb_002073_200 Hb_164010_040 Hb_164010_040 Hb_000868_110--Hb_164010_040 Hb_003001_080 Hb_003001_080 Hb_000868_110--Hb_003001_080 Hb_021576_110 Hb_021576_110 Hb_000868_110--Hb_021576_110 Hb_000869_080 Hb_000869_080 Hb_000868_110--Hb_000869_080 Hb_000562_090 Hb_000562_090 Hb_002671_140--Hb_000562_090 Hb_003609_030 Hb_003609_030 Hb_002671_140--Hb_003609_030 Hb_000442_150 Hb_000442_150 Hb_002671_140--Hb_000442_150 Hb_008246_040 Hb_008246_040 Hb_002671_140--Hb_008246_040 Hb_057878_010 Hb_057878_010 Hb_002671_140--Hb_057878_010 Hb_004586_140--Hb_000179_070 Hb_012389_020 Hb_012389_020 Hb_004586_140--Hb_012389_020 Hb_004586_140--Hb_000302_270 Hb_000061_470 Hb_000061_470 Hb_004586_140--Hb_000061_470 Hb_000308_030 Hb_000308_030 Hb_004586_140--Hb_000308_030 Hb_004586_140--Hb_000521_320 Hb_001409_020 Hb_001409_020 Hb_013399_100--Hb_001409_020 Hb_000060_090 Hb_000060_090 Hb_013399_100--Hb_000060_090 Hb_105105_020 Hb_105105_020 Hb_013399_100--Hb_105105_020 Hb_003504_030 Hb_003504_030 Hb_013399_100--Hb_003504_030 Hb_000780_230 Hb_000780_230 Hb_013399_100--Hb_000780_230 Hb_010618_010 Hb_010618_010 Hb_013399_100--Hb_010618_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.9735 30.43 28.0665 23.1388 24.9119 25.3598
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.7343 25.6403 31.1779 10.7811 12.9048

CAGE analysis