Hb_000060_090

Information

Type transcription factor
Description TF Family: HSF
Location Contig60: 127148-128823
Sequence    

Annotation

kegg
ID rcu:RCOM_1252030
description Heat shock factor protein, putative
nr
ID XP_012091840.1
description PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]
swissprot
ID O49403
description Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1
trembl
ID A0A067JBG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21617 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor a-4a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50548: 127482-128327
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000060_090 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]
2 Hb_013399_100 0.052488083 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001409_020 0.0550489516 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
4 Hb_000029_300 0.0570880939 - - hypothetical protein JCGZ_10048 [Jatropha curcas]
5 Hb_105105_020 0.0603610501 - - vacuolar protein sorting vps41, putative [Ricinus communis]
6 Hb_008643_210 0.0609171377 - - PREDICTED: uncharacterized protein LOC105644223 isoform X1 [Jatropha curcas]
7 Hb_010222_050 0.06378072 - - PREDICTED: WD repeat-containing protein 48 isoform X2 [Jatropha curcas]
8 Hb_010618_010 0.0654529037 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
9 Hb_000789_310 0.0656677279 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
10 Hb_007943_110 0.0659257243 - - PREDICTED: basic salivary proline-rich protein 3 [Jatropha curcas]
11 Hb_016172_020 0.0663072892 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Jatropha curcas]
12 Hb_033642_030 0.0690650068 - - PREDICTED: G-protein coupled receptor 1 isoform X1 [Jatropha curcas]
13 Hb_007576_110 0.0691744616 - - Endoplasmic reticulum vesicle transporter protein [Theobroma cacao]
14 Hb_014361_070 0.0692721977 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
15 Hb_003504_030 0.0699939392 - - PREDICTED: serine/threonine-protein phosphatase PP1-like isoform X2 [Jatropha curcas]
16 Hb_000780_230 0.070027856 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
17 Hb_009548_020 0.0700882964 - - structural constituent of cell wall, putative [Ricinus communis]
18 Hb_001248_060 0.070221873 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003029_110 0.0723408994 - - PREDICTED: uncharacterized protein LOC105640062 isoform X1 [Jatropha curcas]
20 Hb_001047_220 0.0729897043 - - PREDICTED: F-box protein SKIP17-like [Jatropha curcas]

Gene co-expression network

sample Hb_000060_090 Hb_000060_090 Hb_013399_100 Hb_013399_100 Hb_000060_090--Hb_013399_100 Hb_001409_020 Hb_001409_020 Hb_000060_090--Hb_001409_020 Hb_000029_300 Hb_000029_300 Hb_000060_090--Hb_000029_300 Hb_105105_020 Hb_105105_020 Hb_000060_090--Hb_105105_020 Hb_008643_210 Hb_008643_210 Hb_000060_090--Hb_008643_210 Hb_010222_050 Hb_010222_050 Hb_000060_090--Hb_010222_050 Hb_013399_100--Hb_001409_020 Hb_013399_100--Hb_105105_020 Hb_003504_030 Hb_003504_030 Hb_013399_100--Hb_003504_030 Hb_000780_230 Hb_000780_230 Hb_013399_100--Hb_000780_230 Hb_010618_010 Hb_010618_010 Hb_013399_100--Hb_010618_010 Hb_001409_020--Hb_010618_010 Hb_001248_060 Hb_001248_060 Hb_001409_020--Hb_001248_060 Hb_167498_010 Hb_167498_010 Hb_001409_020--Hb_167498_010 Hb_008406_200 Hb_008406_200 Hb_001409_020--Hb_008406_200 Hb_007576_110 Hb_007576_110 Hb_001409_020--Hb_007576_110 Hb_000923_010 Hb_000923_010 Hb_000029_300--Hb_000923_010 Hb_000213_010 Hb_000213_010 Hb_000029_300--Hb_000213_010 Hb_014361_070 Hb_014361_070 Hb_000029_300--Hb_014361_070 Hb_000340_530 Hb_000340_530 Hb_000029_300--Hb_000340_530 Hb_000029_300--Hb_007576_110 Hb_009548_020 Hb_009548_020 Hb_105105_020--Hb_009548_020 Hb_015934_040 Hb_015934_040 Hb_105105_020--Hb_015934_040 Hb_016172_020 Hb_016172_020 Hb_105105_020--Hb_016172_020 Hb_105105_020--Hb_010618_010 Hb_008643_210--Hb_016172_020 Hb_002045_240 Hb_002045_240 Hb_008643_210--Hb_002045_240 Hb_004841_010 Hb_004841_010 Hb_008643_210--Hb_004841_010 Hb_023386_020 Hb_023386_020 Hb_008643_210--Hb_023386_020 Hb_000010_330 Hb_000010_330 Hb_008643_210--Hb_000010_330 Hb_005731_030 Hb_005731_030 Hb_010222_050--Hb_005731_030 Hb_003029_110 Hb_003029_110 Hb_010222_050--Hb_003029_110 Hb_000152_380 Hb_000152_380 Hb_010222_050--Hb_000152_380 Hb_000502_050 Hb_000502_050 Hb_010222_050--Hb_000502_050 Hb_002823_030 Hb_002823_030 Hb_010222_050--Hb_002823_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.7462 19.5964 12.8331 18.9975 22.5356 25.8158
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.5866 16.3637 20.626 11.796 16.4565

CAGE analysis