Hb_000496_100

Information

Type -
Description -
Location Contig496: 83131-84654
Sequence    

Annotation

kegg
ID rcu:RCOM_0992970
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012092083.1
description PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
swissprot
ID P98188
description Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1
trembl
ID A0A067JMV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21816 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp94a1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45469: 84276-84636
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000496_100 0.0 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
2 Hb_010737_030 0.0349509995 - - unnamed protein product [Vitis vinifera]
3 Hb_028486_020 0.0558342778 - - conserved hypothetical protein [Ricinus communis]
4 Hb_018663_010 0.05633385 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
5 Hb_102900_010 0.058227682 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Jatropha curcas]
6 Hb_000130_400 0.0685296167 transcription factor TF Family: bZIP hypothetical protein POPTR_0001s38320g [Populus trichocarpa]
7 Hb_008165_010 0.0736169994 - - PREDICTED: 36.4 kDa proline-rich protein [Solanum lycopersicum]
8 Hb_000436_110 0.0740942337 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
9 Hb_000051_130 0.0776890507 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
10 Hb_000375_200 0.0792754428 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
11 Hb_102129_040 0.0824080117 - - PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X1 [Jatropha curcas]
12 Hb_000751_010 0.0853785313 - - conserved hypothetical protein [Ricinus communis]
13 Hb_059832_010 0.0857457681 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]
14 Hb_006586_060 0.0858971125 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
15 Hb_001221_550 0.08727638 - - Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis]
16 Hb_000028_010 0.0878087305 - - cytochrome P450, putative [Ricinus communis]
17 Hb_061336_010 0.0886828751 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000187_020 0.0925800513 - - Xanthine/uracil permease family protein isoform 1 [Theobroma cacao]
19 Hb_000193_170 0.0937153029 transcription factor TF Family: MYB Myb domain 16-like protein [Theobroma cacao]
20 Hb_002893_220 0.0948251783 - - hypothetical protein B456_001G004300 [Gossypium raimondii]

Gene co-expression network

sample Hb_000496_100 Hb_000496_100 Hb_010737_030 Hb_010737_030 Hb_000496_100--Hb_010737_030 Hb_028486_020 Hb_028486_020 Hb_000496_100--Hb_028486_020 Hb_018663_010 Hb_018663_010 Hb_000496_100--Hb_018663_010 Hb_102900_010 Hb_102900_010 Hb_000496_100--Hb_102900_010 Hb_000130_400 Hb_000130_400 Hb_000496_100--Hb_000130_400 Hb_008165_010 Hb_008165_010 Hb_000496_100--Hb_008165_010 Hb_010737_030--Hb_018663_010 Hb_010737_030--Hb_102900_010 Hb_000436_110 Hb_000436_110 Hb_010737_030--Hb_000436_110 Hb_010737_030--Hb_008165_010 Hb_000375_200 Hb_000375_200 Hb_010737_030--Hb_000375_200 Hb_061336_010 Hb_061336_010 Hb_028486_020--Hb_061336_010 Hb_000816_180 Hb_000816_180 Hb_028486_020--Hb_000816_180 Hb_072952_010 Hb_072952_010 Hb_028486_020--Hb_072952_010 Hb_000375_100 Hb_000375_100 Hb_028486_020--Hb_000375_100 Hb_007576_090 Hb_007576_090 Hb_028486_020--Hb_007576_090 Hb_018663_010--Hb_008165_010 Hb_018663_010--Hb_000375_200 Hb_018663_010--Hb_000436_110 Hb_018663_010--Hb_102900_010 Hb_000751_010 Hb_000751_010 Hb_102900_010--Hb_000751_010 Hb_102900_010--Hb_008165_010 Hb_102129_040 Hb_102129_040 Hb_102900_010--Hb_102129_040 Hb_102900_010--Hb_000436_110 Hb_000130_400--Hb_000375_200 Hb_059832_010 Hb_059832_010 Hb_000130_400--Hb_059832_010 Hb_000193_170 Hb_000193_170 Hb_000130_400--Hb_000193_170 Hb_000130_400--Hb_028486_020 Hb_000187_020 Hb_000187_020 Hb_000130_400--Hb_000187_020 Hb_008165_010--Hb_000436_110 Hb_002235_260 Hb_002235_260 Hb_008165_010--Hb_002235_260 Hb_004117_060 Hb_004117_060 Hb_008165_010--Hb_004117_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.93802 1.05889 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.707043

CAGE analysis