Hb_000086_460

Information

Type -
Description -
Location Contig86: 362745-367021
Sequence    

Annotation

kegg
ID rcu:RCOM_0543240
description oligopeptide transporter, putative
nr
ID XP_012085263.1
description PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
swissprot
ID Q9LFB8
description Protein NRT1/ PTR FAMILY 8.2 OS=Arabidopsis thaliana GN=NPF8.2 PE=2 SV=1
trembl
ID A0A067K3U8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17647 PE=4 SV=1
Gene Ontology
ID GO:0016020
description protein nrt1 ptr family -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60751: 362869-363411
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_460 0.0 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
2 Hb_033149_010 0.0977924786 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_003793_010 0.0988540441 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
4 Hb_000445_410 0.09925955 - - hypothetical protein EUGRSUZ_F02776 [Eucalyptus grandis]
5 Hb_000608_090 0.1032758153 - - conserved hypothetical protein [Ricinus communis]
6 Hb_103225_040 0.1044292012 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 12-like [Jatropha curcas]
7 Hb_092010_010 0.10974606 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
8 Hb_001373_170 0.1113099576 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 9 [Jatropha curcas]
9 Hb_152868_020 0.1139384951 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
10 Hb_008008_040 0.1143040326 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
11 Hb_000007_190 0.1159899426 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Jatropha curcas]
12 Hb_001456_030 0.1182174419 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
13 Hb_000037_150 0.1237685004 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
14 Hb_181908_010 0.1252232955 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
15 Hb_005616_020 0.1252298765 - - kinase, putative [Ricinus communis]
16 Hb_000964_080 0.1255022665 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
17 Hb_001454_420 0.1255221196 - - multidrug resistance pump, putative [Ricinus communis]
18 Hb_000729_040 0.1258342064 - - xyloglucan endotransglucosylase/hydrolase protein 10 precursor [Populus trichocarpa]
19 Hb_019953_010 0.1264320485 - - hypothetical protein CICLE_v10019877mg [Citrus clementina]
20 Hb_000392_500 0.1276337369 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000086_460 Hb_000086_460 Hb_033149_010 Hb_033149_010 Hb_000086_460--Hb_033149_010 Hb_003793_010 Hb_003793_010 Hb_000086_460--Hb_003793_010 Hb_000445_410 Hb_000445_410 Hb_000086_460--Hb_000445_410 Hb_000608_090 Hb_000608_090 Hb_000086_460--Hb_000608_090 Hb_103225_040 Hb_103225_040 Hb_000086_460--Hb_103225_040 Hb_092010_010 Hb_092010_010 Hb_000086_460--Hb_092010_010 Hb_019953_010 Hb_019953_010 Hb_033149_010--Hb_019953_010 Hb_033149_010--Hb_003793_010 Hb_033149_010--Hb_103225_040 Hb_033149_010--Hb_000445_410 Hb_000007_190 Hb_000007_190 Hb_033149_010--Hb_000007_190 Hb_152868_020 Hb_152868_020 Hb_033149_010--Hb_152868_020 Hb_003793_010--Hb_000445_410 Hb_003793_010--Hb_103225_040 Hb_003793_010--Hb_152868_020 Hb_008008_040 Hb_008008_040 Hb_003793_010--Hb_008008_040 Hb_003793_010--Hb_000007_190 Hb_000445_410--Hb_103225_040 Hb_000445_410--Hb_152868_020 Hb_000445_410--Hb_008008_040 Hb_001373_170 Hb_001373_170 Hb_000445_410--Hb_001373_170 Hb_005616_020 Hb_005616_020 Hb_000608_090--Hb_005616_020 Hb_031330_010 Hb_031330_010 Hb_000608_090--Hb_031330_010 Hb_004586_440 Hb_004586_440 Hb_000608_090--Hb_004586_440 Hb_001158_170 Hb_001158_170 Hb_000608_090--Hb_001158_170 Hb_003376_060 Hb_003376_060 Hb_000608_090--Hb_003376_060 Hb_001456_030 Hb_001456_030 Hb_000608_090--Hb_001456_030 Hb_103225_040--Hb_152868_020 Hb_103225_040--Hb_000007_190 Hb_000392_500 Hb_000392_500 Hb_103225_040--Hb_000392_500 Hb_001454_420 Hb_001454_420 Hb_092010_010--Hb_001454_420 Hb_005653_050 Hb_005653_050 Hb_092010_010--Hb_005653_050 Hb_004225_010 Hb_004225_010 Hb_092010_010--Hb_004225_010 Hb_092010_010--Hb_001373_170 Hb_181908_010 Hb_181908_010 Hb_092010_010--Hb_181908_010 Hb_092010_010--Hb_008008_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0196333 0 0.402363 5.12509 0.00983026 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0175531 0.0665909 0.0139654 1.89247

CAGE analysis