Hb_000061_390

Information

Type -
Description -
Location Contig61: 334387-339821
Sequence    

Annotation

kegg
ID rcu:RCOM_1470750
description hypothetical protein
nr
ID XP_012080328.1
description PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K8H7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11679 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_390 0.0 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
2 Hb_001049_030 0.1743030178 - - catalytic, putative [Ricinus communis]
3 Hb_004310_050 0.199063182 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
4 Hb_012573_080 0.2022691954 - - hypothetical protein JCGZ_13311 [Jatropha curcas]
5 Hb_000173_400 0.2044646536 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Jatropha curcas]
6 Hb_000987_140 0.2085398423 - - PREDICTED: uncharacterized protein LOC105648083 isoform X1 [Jatropha curcas]
7 Hb_000011_080 0.2114333265 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like [Jatropha curcas]
8 Hb_005914_150 0.2120148072 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
9 Hb_001900_110 0.2126276726 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit E [Jatropha curcas]
10 Hb_000270_020 0.2146015653 - - hypothetical protein POPTR_0015s07630g [Populus trichocarpa]
11 Hb_000768_060 0.2169190356 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
12 Hb_002248_140 0.217604858 - - acetylglucosaminyltransferase, putative [Ricinus communis]
13 Hb_042038_020 0.2184445869 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Jatropha curcas]
14 Hb_006723_020 0.2186469195 - - ARF2-B: ADP-ribosylation factor 2-B [Gossypium arboreum]
15 Hb_000062_250 0.2204141687 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
16 Hb_030328_010 0.2207080502 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
17 Hb_141547_010 0.2208194439 - - PREDICTED: ARF guanine-nucleotide exchange factor GNOM [Jatropha curcas]
18 Hb_001769_010 0.2210044564 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011218_070 0.2215001998 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
20 Hb_001771_130 0.2215582908 - - PREDICTED: pentatricopeptide repeat-containing protein At2g27610 [Jatropha curcas]

Gene co-expression network

sample Hb_000061_390 Hb_000061_390 Hb_001049_030 Hb_001049_030 Hb_000061_390--Hb_001049_030 Hb_004310_050 Hb_004310_050 Hb_000061_390--Hb_004310_050 Hb_012573_080 Hb_012573_080 Hb_000061_390--Hb_012573_080 Hb_000173_400 Hb_000173_400 Hb_000061_390--Hb_000173_400 Hb_000987_140 Hb_000987_140 Hb_000061_390--Hb_000987_140 Hb_000011_080 Hb_000011_080 Hb_000061_390--Hb_000011_080 Hb_006573_200 Hb_006573_200 Hb_001049_030--Hb_006573_200 Hb_011218_070 Hb_011218_070 Hb_001049_030--Hb_011218_070 Hb_000077_230 Hb_000077_230 Hb_001049_030--Hb_000077_230 Hb_012395_220 Hb_012395_220 Hb_001049_030--Hb_012395_220 Hb_042038_020 Hb_042038_020 Hb_001049_030--Hb_042038_020 Hb_000953_010 Hb_000953_010 Hb_001049_030--Hb_000953_010 Hb_010080_060 Hb_010080_060 Hb_004310_050--Hb_010080_060 Hb_000046_450 Hb_000046_450 Hb_004310_050--Hb_000046_450 Hb_000699_250 Hb_000699_250 Hb_004310_050--Hb_000699_250 Hb_000865_080 Hb_000865_080 Hb_004310_050--Hb_000865_080 Hb_008714_020 Hb_008714_020 Hb_004310_050--Hb_008714_020 Hb_006816_300 Hb_006816_300 Hb_004310_050--Hb_006816_300 Hb_012573_080--Hb_000987_140 Hb_012573_080--Hb_042038_020 Hb_001123_290 Hb_001123_290 Hb_012573_080--Hb_001123_290 Hb_000140_070 Hb_000140_070 Hb_012573_080--Hb_000140_070 Hb_164010_070 Hb_164010_070 Hb_012573_080--Hb_164010_070 Hb_012573_080--Hb_001049_030 Hb_000173_400--Hb_000953_010 Hb_004055_040 Hb_004055_040 Hb_000173_400--Hb_004055_040 Hb_004734_060 Hb_004734_060 Hb_000173_400--Hb_004734_060 Hb_002928_060 Hb_002928_060 Hb_000173_400--Hb_002928_060 Hb_000803_190 Hb_000803_190 Hb_000173_400--Hb_000803_190 Hb_001771_130 Hb_001771_130 Hb_000173_400--Hb_001771_130 Hb_000836_270 Hb_000836_270 Hb_000987_140--Hb_000836_270 Hb_000987_140--Hb_042038_020 Hb_011311_020 Hb_011311_020 Hb_000987_140--Hb_011311_020 Hb_000418_070 Hb_000418_070 Hb_000987_140--Hb_000418_070 Hb_005914_150 Hb_005914_150 Hb_000987_140--Hb_005914_150 Hb_000011_080--Hb_001771_130 Hb_033152_080 Hb_033152_080 Hb_000011_080--Hb_033152_080 Hb_000230_080 Hb_000230_080 Hb_000011_080--Hb_000230_080 Hb_000011_080--Hb_004734_060 Hb_000011_080--Hb_000173_400 Hb_005324_010 Hb_005324_010 Hb_000011_080--Hb_005324_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.1593 6.96422 0.63663 1.764 1.08758 10.6342
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.93562 0.916126 6.42206 2.07909 1.01323

CAGE analysis