Hb_000011_370

Information

Type -
Description -
Location Contig11: 394176-395134
Sequence    

Annotation

kegg
ID pop:POPTR_0001s16370g
description hypothetical protein
nr
ID XP_012068803.1
description PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KWV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24636 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_370 0.0 - - PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
2 Hb_005731_070 0.0820828494 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000749_120 0.1038064296 - - PREDICTED: uncharacterized protein LOC105644255 isoform X2 [Jatropha curcas]
4 Hb_008566_080 0.1043474975 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
5 Hb_000714_060 0.1050268462 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 1-like [Populus euphratica]
6 Hb_000014_080 0.1067866258 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
7 Hb_001597_030 0.1128389718 - - PREDICTED: uncharacterized protein LOC104445128 isoform X1 [Eucalyptus grandis]
8 Hb_000956_070 0.1131624417 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
9 Hb_001138_070 0.1132886789 - - PREDICTED: D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like [Jatropha curcas]
10 Hb_001677_090 0.1135869825 - - PREDICTED: CASP-like protein 5B2 [Jatropha curcas]
11 Hb_093218_010 0.1198732584 - - hypothetical protein POPTR_0001s05220g [Populus trichocarpa]
12 Hb_008175_050 0.1199702499 - - PREDICTED: formin-like protein 2 [Jatropha curcas]
13 Hb_015001_030 0.1206398474 - - inosine-uridine preferring nucleoside hydrolase family protein [Populus trichocarpa]
14 Hb_027556_060 0.1227075538 - - hypothetical protein POPTR_0001s03520g [Populus trichocarpa]
15 Hb_007386_030 0.124399132 - - PREDICTED: formin-like protein 2 [Jatropha curcas]
16 Hb_022250_160 0.1256687754 - - respiratory burst oxidase A [Manihot esculenta]
17 Hb_003189_010 0.1287628587 - - hypothetical protein EUGRSUZ_G02605 [Eucalyptus grandis]
18 Hb_007017_100 0.1290047347 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
19 Hb_001157_190 0.1291537057 - - PREDICTED: protein YLS3 [Jatropha curcas]
20 Hb_000997_240 0.1297755834 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA4, putative [Ricinus communis]

Gene co-expression network

sample Hb_000011_370 Hb_000011_370 Hb_005731_070 Hb_005731_070 Hb_000011_370--Hb_005731_070 Hb_000749_120 Hb_000749_120 Hb_000011_370--Hb_000749_120 Hb_008566_080 Hb_008566_080 Hb_000011_370--Hb_008566_080 Hb_000714_060 Hb_000714_060 Hb_000011_370--Hb_000714_060 Hb_000014_080 Hb_000014_080 Hb_000011_370--Hb_000014_080 Hb_001597_030 Hb_001597_030 Hb_000011_370--Hb_001597_030 Hb_007386_030 Hb_007386_030 Hb_005731_070--Hb_007386_030 Hb_007017_100 Hb_007017_100 Hb_005731_070--Hb_007017_100 Hb_005731_070--Hb_000714_060 Hb_005731_070--Hb_000014_080 Hb_000594_160 Hb_000594_160 Hb_005731_070--Hb_000594_160 Hb_000749_120--Hb_001597_030 Hb_027556_060 Hb_027556_060 Hb_000749_120--Hb_027556_060 Hb_008143_060 Hb_008143_060 Hb_000749_120--Hb_008143_060 Hb_000749_120--Hb_005731_070 Hb_005144_080 Hb_005144_080 Hb_000749_120--Hb_005144_080 Hb_008566_080--Hb_007386_030 Hb_004079_100 Hb_004079_100 Hb_008566_080--Hb_004079_100 Hb_008566_080--Hb_000014_080 Hb_022250_160 Hb_022250_160 Hb_008566_080--Hb_022250_160 Hb_003411_020 Hb_003411_020 Hb_008566_080--Hb_003411_020 Hb_093218_010 Hb_093218_010 Hb_000714_060--Hb_093218_010 Hb_032260_060 Hb_032260_060 Hb_000714_060--Hb_032260_060 Hb_000951_090 Hb_000951_090 Hb_000714_060--Hb_000951_090 Hb_001473_060 Hb_001473_060 Hb_000714_060--Hb_001473_060 Hb_001104_020 Hb_001104_020 Hb_000714_060--Hb_001104_020 Hb_004282_010 Hb_004282_010 Hb_000014_080--Hb_004282_010 Hb_000956_070 Hb_000956_070 Hb_000014_080--Hb_000956_070 Hb_001568_010 Hb_001568_010 Hb_000014_080--Hb_001568_010 Hb_006501_100 Hb_006501_100 Hb_000014_080--Hb_006501_100 Hb_000014_080--Hb_007386_030 Hb_000834_220 Hb_000834_220 Hb_001597_030--Hb_000834_220 Hb_001157_190 Hb_001157_190 Hb_001597_030--Hb_001157_190 Hb_003540_120 Hb_003540_120 Hb_001597_030--Hb_003540_120 Hb_001138_070 Hb_001138_070 Hb_001597_030--Hb_001138_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0342354 1.31747 5.17866 8.66526 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.158039 0.124244 0 5.43034 2.83173

CAGE analysis