Gene annotation
Transcriptome id Sobic.009G144200.1
Synonym Sb09g020930, PGSIP1, GUX1
Functional annotation glycosyl transferase, putative, expressed
UniProt C5YY87
Pfam PF01501
Panther DB PTHR11183 PTHR11183:SF62
NCBI CDD KOG1950; Glycosyl transferase, family 8 - glycogenin
KEGG Orthology -
Gene Ontology GO:0016757; glycosyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G77130 : plant glycogenin-like starch initiation protein 2
RAP-DB (Rice) LOC_Os01g65780.1 : glycosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a043746 , Zm00025a039505 , Zm00025a026577
Brachypodium PNT71199 , KQK10880 , PNT71201 , KQK06135 , PNT71200 , PNT71202 , KQK06136 , KQK06134
Barley HORVU3Hr1G091400.6 , HORVU3Hr1G091400.5 , HORVU3Hr1G091400.4 , HORVU3Hr1G091400.3 , HORVU3Hr1G091400.2 , HORVU3Hr1G091400.1 , HORVU0Hr1G000650.2 , HORVU0Hr1G000650.1 , HORVU1Hr1G065560.1 , HORVU1Hr1G065560.3 , HORVU1Hr1G065560.2 , HORVU1Hr1G065560.5 , HORVU1Hr1G065560.4 , HORVU1Hr1G065560.7 , HORVU1Hr1G065560.6 , HORVU1Hr1G065560.8 , HORVU0Hr1G000670.1 , HORVU0Hr1G000670.3 , HORVU0Hr1G000670.2
Wheat TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3D02G404100 , TraesCS1B02G277500 , TraesCS1D02G266700 , TraesCS1D02G266700 , TraesCS3D02G404100 , TraesCS3A02G409200 , TraesCS3A02G409200 , TraesCS1A02G266600 , TraesCS1A02G266600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G144200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243400 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
2 Sobic.007G001900 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.008G064601 - -
4 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
5 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.008G190500 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.010G126100 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
10 Sobic.001G405000 MRH1, putative, expressed -
11 Sobic.010G123300 expressed protein -
12 Sobic.001G334900 X8 domain containing protein, expressed -
13 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.002G317800 BNR/Asp-box repeat family protein, putative, expressed -
16 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
17 Sobic.007G166600 copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
18 Sobic.010G243000 protein kinase domain containing protein, expressed -
19 Sobic.003G098600 expressed protein -
20 Sobic.008G008500 protein phosphatase 2c, putative, expressed -


Gene co-expression network
sample Sobic009G144200 Sobic009G144200 Sobic004G243400 Sobic004G243400 Sobic009G144200--Sobic004G243400 Sobic007G001900 Sobic007G001900 Sobic009G144200--Sobic007G001900 Sobic008G064601 Sobic008G064601 Sobic009G144200--Sobic008G064601 Sobic009G055900 Sobic009G055900 Sobic009G144200--Sobic009G055900 Sobic001G021500 Sobic001G021500 Sobic009G144200--Sobic001G021500 Sobic003G134900 Sobic003G134900 Sobic009G144200--Sobic003G134900 Sobic008G190500 Sobic008G190500 Sobic009G144200--Sobic008G190500 Sobic004G168700 Sobic004G168700 Sobic009G144200--Sobic004G168700 Sobic010G126100 Sobic010G126100 Sobic009G144200--Sobic010G126100 Sobic004G243400--Sobic001G021500 Sobic004G243400--Sobic009G055900 Sobic004G243400--Sobic009G144200 Sobic001G405000 Sobic001G405000 Sobic004G243400--Sobic001G405000 Sobic003G098600 Sobic003G098600 Sobic004G243400--Sobic003G098600 Sobic002G003200 Sobic002G003200 Sobic004G243400--Sobic002G003200 Sobic003G176200 Sobic003G176200 Sobic004G243400--Sobic003G176200 Sobic004G044100 Sobic004G044100 Sobic004G243400--Sobic004G044100 Sobic008G008500 Sobic008G008500 Sobic004G243400--Sobic008G008500 Sobic010G112800 Sobic010G112800 Sobic007G001900--Sobic010G112800 Sobic007G001900--Sobic009G144200 Sobic002G276600 Sobic002G276600 Sobic007G001900--Sobic002G276600 Sobic008G055000 Sobic008G055000 Sobic007G001900--Sobic008G055000 Sobic010G090500 Sobic010G090500 Sobic007G001900--Sobic010G090500 Sobic009G226900 Sobic009G226900 Sobic007G001900--Sobic009G226900 Sobic004G243800 Sobic004G243800 Sobic007G001900--Sobic004G243800 Sobic001G316000 Sobic001G316000 Sobic007G001900--Sobic001G316000 Sobic003G098500 Sobic003G098500 Sobic007G001900--Sobic003G098500 Sobic008G064601--Sobic010G126100 Sobic008G064601--Sobic009G144200 Sobic002G133100 Sobic002G133100 Sobic008G064601--Sobic002G133100 Sobic008G064601--Sobic009G055900 Sobic003G071600 Sobic003G071600 Sobic008G064601--Sobic003G071600 Sobic008G143600 Sobic008G143600 Sobic008G064601--Sobic008G143600 Sobic010G122200 Sobic010G122200 Sobic008G064601--Sobic010G122200 Sobic003G052600 Sobic003G052600 Sobic008G064601--Sobic003G052600 Sobic008G186500 Sobic008G186500 Sobic008G064601--Sobic008G186500 Sobic009G055900--Sobic008G143600 Sobic002G377300 Sobic002G377300 Sobic009G055900--Sobic002G377300 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic001G021500--Sobic004G243400 Sobic001G021500--Sobic002G377300 Sobic001G021500--Sobic009G055900 Sobic003G165800 Sobic003G165800 Sobic001G021500--Sobic003G165800 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic010G243000 Sobic010G243000 Sobic003G134900--Sobic010G243000 Sobic003G134900--Sobic009G144200 Sobic005G116500 Sobic005G116500 Sobic003G134900--Sobic005G116500 Sobic009G221900 Sobic009G221900 Sobic003G134900--Sobic009G221900 Sobic009G232200 Sobic009G232200 Sobic003G134900--Sobic009G232200 Sobic003G136600 Sobic003G136600 Sobic003G134900--Sobic003G136600 Sobic004G257700 Sobic004G257700 Sobic003G134900--Sobic004G257700 Sobic009G251100 Sobic009G251100 Sobic003G134900--Sobic009G251100 Sobic008G097500 Sobic008G097500 Sobic003G134900--Sobic008G097500 Sobic008G190500--Sobic007G210900 Sobic008G086200 Sobic008G086200 Sobic008G190500--Sobic008G086200 Sobic010G135300 Sobic010G135300 Sobic008G190500--Sobic010G135300 Sobic003G077500 Sobic003G077500 Sobic008G190500--Sobic003G077500 Sobic008G190500--Sobic001G021500 Sobic003G023400 Sobic003G023400 Sobic008G190500--Sobic003G023400 Sobic009G123500 Sobic009G123500 Sobic008G190500--Sobic009G123500 Sobic003G420800 Sobic003G420800 Sobic008G190500--Sobic003G420800 Sobic001G315400 Sobic001G315400 Sobic008G190500--Sobic001G315400 Sobic010G086800 Sobic010G086800 Sobic004G168700--Sobic010G086800 Sobic009G032600 Sobic009G032600 Sobic004G168700--Sobic009G032600 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic002G072200 Sobic002G072200 Sobic004G168700--Sobic002G072200 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic006G100900 Sobic006G100900 Sobic010G126100--Sobic006G100900 Sobic004G224700 Sobic004G224700 Sobic010G126100--Sobic004G224700 Sobic003G305300 Sobic003G305300 Sobic010G126100--Sobic003G305300 Sobic010G126100--Sobic008G064601 Sobic006G060700 Sobic006G060700 Sobic010G126100--Sobic006G060700 Sobic002G242600 Sobic002G242600 Sobic010G126100--Sobic002G242600 Sobic002G190100 Sobic002G190100 Sobic010G126100--Sobic002G190100 Sobic001G042301 Sobic001G042301 Sobic010G126100--Sobic001G042301 Sobic004G191200 Sobic004G191200 Sobic010G126100--Sobic004G191200
Octagon: transcription factors


© 2022 RIKEN, All rights reserved.