Gene annotation
Transcriptome id Sobic.003G134900.1
Synonym Sb03g011470, AtENODL18, ENODL18
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5XHD8
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT1G08500 : early nodulin-like protein 18
RAP-DB (Rice) LOC_Os01g17470.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024195
Brachypodium KQK03975
Barley HORVU3Hr1G028710.1
Wheat TraesCS3A02G132300 , TraesCS3B02G167200 , TraesCS3D02G148500
Populus -


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cDNA sequences
Sobic.003G134900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G243000 protein kinase domain containing protein, expressed -
2 Sobic.009G144200 glycosyl transferase, putative, expressed -
3 Sobic.005G116500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
4 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
6 Sobic.003G136600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
8 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
9 Sobic.008G097500 expressed protein -
10 Sobic.008G091557 - -
11 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.002G072200 expressed protein -
13 Sobic.001G334900 X8 domain containing protein, expressed -
14 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -
15 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
16 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
17 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
19 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1


Gene co-expression network
sample Sobic003G134900 Sobic003G134900 Sobic010G243000 Sobic010G243000 Sobic003G134900--Sobic010G243000 Sobic009G144200 Sobic009G144200 Sobic003G134900--Sobic009G144200 Sobic005G116500 Sobic005G116500 Sobic003G134900--Sobic005G116500 Sobic009G221900 Sobic009G221900 Sobic003G134900--Sobic009G221900 Sobic009G232200 Sobic009G232200 Sobic003G134900--Sobic009G232200 Sobic003G136600 Sobic003G136600 Sobic003G134900--Sobic003G136600 Sobic004G257700 Sobic004G257700 Sobic003G134900--Sobic004G257700 Sobic009G251100 Sobic009G251100 Sobic003G134900--Sobic009G251100 Sobic008G097500 Sobic008G097500 Sobic003G134900--Sobic008G097500 Sobic010G243000--Sobic003G134900 Sobic010G243000--Sobic004G257700 Sobic010G243000--Sobic009G251100 Sobic010G120300 Sobic010G120300 Sobic010G243000--Sobic010G120300 Sobic001G073150 Sobic001G073150 Sobic010G243000--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic010G243000--Sobic004G243800 Sobic007G190200 Sobic007G190200 Sobic010G243000--Sobic007G190200 Sobic008G032000 Sobic008G032000 Sobic010G243000--Sobic008G032000 Sobic001G275600 Sobic001G275600 Sobic010G243000--Sobic001G275600 Sobic004G243400 Sobic004G243400 Sobic009G144200--Sobic004G243400 Sobic007G001900 Sobic007G001900 Sobic009G144200--Sobic007G001900 Sobic008G064601 Sobic008G064601 Sobic009G144200--Sobic008G064601 Sobic009G055900 Sobic009G055900 Sobic009G144200--Sobic009G055900 Sobic001G021500 Sobic001G021500 Sobic009G144200--Sobic001G021500 Sobic009G144200--Sobic003G134900 Sobic008G190500 Sobic008G190500 Sobic009G144200--Sobic008G190500 Sobic004G168700 Sobic004G168700 Sobic009G144200--Sobic004G168700 Sobic010G126100 Sobic010G126100 Sobic009G144200--Sobic010G126100 Sobic002G366500 Sobic002G366500 Sobic005G116500--Sobic002G366500 Sobic006G074300 Sobic006G074300 Sobic005G116500--Sobic006G074300 Sobic001G012600 Sobic001G012600 Sobic005G116500--Sobic001G012600 Sobic001G012200 Sobic001G012200 Sobic005G116500--Sobic001G012200 Sobic005G116500--Sobic004G257700 Sobic005G116500--Sobic003G134900 Sobic007G195300 Sobic007G195300 Sobic005G116500--Sobic007G195300 Sobic005G224500 Sobic005G224500 Sobic005G116500--Sobic005G224500 Sobic002G347300 Sobic002G347300 Sobic005G116500--Sobic002G347300 Sobic001G263900 Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic009G221900--Sobic002G347300 Sobic009G017500 Sobic009G017500 Sobic009G221900--Sobic009G017500 Sobic003G099166 Sobic003G099166 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic008G091557 Sobic008G091557 Sobic009G221900--Sobic008G091557 Sobic001G208600 Sobic001G208600 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic001G334900 Sobic001G334900 Sobic009G232200--Sobic001G334900 Sobic009G232200--Sobic002G347300 Sobic002G338400 Sobic002G338400 Sobic009G232200--Sobic002G338400 Sobic006G278100 Sobic006G278100 Sobic009G232200--Sobic006G278100 Sobic006G075000 Sobic006G075000 Sobic009G232200--Sobic006G075000 Sobic009G232200--Sobic004G168700 Sobic002G072200 Sobic002G072200 Sobic009G232200--Sobic002G072200 Sobic009G032600 Sobic009G032600 Sobic009G232200--Sobic009G032600 Sobic002G252000 Sobic002G252000 Sobic009G232200--Sobic002G252000 Sobic002G075500 Sobic002G075500 Sobic003G136600--Sobic002G075500 Sobic009G063400 Sobic009G063400 Sobic003G136600--Sobic009G063400 Sobic002G118700 Sobic002G118700 Sobic003G136600--Sobic002G118700 Sobic003G136600--Sobic009G232200 Sobic003G136600--Sobic002G072200 Sobic003G136600--Sobic009G032600 Sobic003G136600--Sobic003G134900 Sobic009G026101 Sobic009G026101 Sobic003G136600--Sobic009G026101 Sobic003G136600--Sobic001G334900 Sobic005G190800 Sobic005G190800 Sobic004G257700--Sobic005G190800 Sobic002G128600 Sobic002G128600 Sobic004G257700--Sobic002G128600 Sobic001G472000 Sobic001G472000 Sobic004G257700--Sobic001G472000 Sobic008G189500 Sobic008G189500 Sobic004G257700--Sobic008G189500 Sobic001G068600 Sobic001G068600 Sobic004G257700--Sobic001G068600 Sobic005G029400 Sobic005G029400 Sobic004G257700--Sobic005G029400 Sobic005G218201 Sobic005G218201 Sobic004G257700--Sobic005G218201 Sobic005G218600 Sobic005G218600 Sobic004G257700--Sobic005G218600 Sobic001G255300 Sobic001G255300 Sobic004G257700--Sobic001G255300 Sobic004G296300 Sobic004G296300 Sobic009G251100--Sobic004G296300 Sobic009G251100--Sobic010G120300 Sobic010G096100 Sobic010G096100 Sobic009G251100--Sobic010G096100 Sobic003G419600 Sobic003G419600 Sobic009G251100--Sobic003G419600 Sobic001G196000 Sobic001G196000 Sobic009G251100--Sobic001G196000 Sobic009G251100--Sobic001G073150 Sobic009G251100--Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic009G251100--Sobic001G437500 Sobic009G251100--Sobic009G063400 Sobic010G022400 Sobic010G022400 Sobic008G097500--Sobic010G022400 Sobic004G034200 Sobic004G034200 Sobic008G097500--Sobic004G034200 Sobic008G097500--Sobic003G134900 Sobic001G316000 Sobic001G316000 Sobic008G097500--Sobic001G316000 Sobic002G312700 Sobic002G312700 Sobic008G097500--Sobic002G312700 Sobic003G056000 Sobic003G056000 Sobic008G097500--Sobic003G056000 Sobic003G286800 Sobic003G286800 Sobic008G097500--Sobic003G286800 Sobic003G198500 Sobic003G198500 Sobic008G097500--Sobic003G198500 Sobic001G336700 Sobic001G336700 Sobic008G097500--Sobic001G336700
Octagon: transcription factors


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