Gene annotation
Transcriptome id Sobic.004G257700.1
Synonym Sb04g029630
Functional annotation aspartic proteinase nepenthesin-1 precursor, putative, expressed
UniProt C5XZT7
Pfam PF14541 PF14543
Panther DB PTHR13683 PTHR13683:SF329
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os02g48900.1 : aspartic proteinase nepenthesin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021838 , Zm00025a030870 , Zm00025a050558
Brachypodium KQK01556
Barley HORVU6Hr1G071270.5 , HORVU6Hr1G071270.4 , HORVU6Hr1G071270.3 , HORVU6Hr1G071270.2 , HORVU6Hr1G071270.1 , HORVU6Hr1G071210.1 , HORVU6Hr1G071210.3 , HORVU6Hr1G071210.2 , HORVU6Hr1G071210.5 , HORVU6Hr1G071210.8 , HORVU6Hr1G071520.3 , HORVU6Hr1G071520.2 , HORVU6Hr1G071520.1 , HORVU6Hr1G071520.7 , HORVU6Hr1G071520.6 , HORVU6Hr1G071520.5 , HORVU6Hr1G071520.4 , HORVU6Hr1G071520.8 , HORVU6Hr1G071280.2 , HORVU6Hr1G071280.1 , HORVU7Hr1G045580.7 , HORVU7Hr1G045580.6 , HORVU7Hr1G045580.5 , HORVU7Hr1G045580.4 , HORVU7Hr1G045580.3 , HORVU7Hr1G045580.2 , HORVU7Hr1G045580.1 , HORVU7Hr1G045580.8 , HORVU6Hr1G071390.1 , HORVU6Hr1G071210.4
Wheat TraesCS7D02G222800 , TraesCS6D02G264200 , TraesCS6D02G264200 , TraesCS6B02G312000 , TraesCS6B02G312000 , TraesCS7B02G128000 , TraesCS6A02G283700 , TraesCS6A02G283700 , TraesCS7A02G219300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
2 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
3 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
4 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.001G068600 app1, putative, expressed -
6 Sobic.005G029400 strictosidine synthase, putative, expressed -
7 Sobic.005G218201 - -
8 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
10 Sobic.004G328900 expressed protein -
11 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.007G181000 serpin domain containing protein, putative, expressed K13963: serpin B
13 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
14 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
15 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
16 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
17 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.002G207900 WAX2, putative, expressed -
19 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic004G257700 Sobic004G257700 Sobic005G190800 Sobic005G190800 Sobic004G257700--Sobic005G190800 Sobic002G128600 Sobic002G128600 Sobic004G257700--Sobic002G128600 Sobic001G472000 Sobic001G472000 Sobic004G257700--Sobic001G472000 Sobic008G189500 Sobic008G189500 Sobic004G257700--Sobic008G189500 Sobic001G068600 Sobic001G068600 Sobic004G257700--Sobic001G068600 Sobic005G029400 Sobic005G029400 Sobic004G257700--Sobic005G029400 Sobic005G218201 Sobic005G218201 Sobic004G257700--Sobic005G218201 Sobic005G218600 Sobic005G218600 Sobic004G257700--Sobic005G218600 Sobic001G255300 Sobic001G255300 Sobic004G257700--Sobic001G255300 Sobic006G175700 Sobic006G175700 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic003G007800 Sobic003G007800 Sobic005G190800--Sobic003G007800 Sobic006G227000 Sobic006G227000 Sobic005G190800--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic005G190800--Sobic001G249500 Sobic003G317800 Sobic003G317800 Sobic005G190800--Sobic003G317800 Sobic004G038300 Sobic004G038300 Sobic005G190800--Sobic004G038300 Sobic004G328900 Sobic004G328900 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic002G128600--Sobic001G249500 Sobic002G128600--Sobic004G328900 Sobic001G379300 Sobic001G379300 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic001G472000--Sobic008G189500 Sobic001G472000--Sobic003G007800 Sobic001G472000--Sobic005G029400 Sobic009G161100 Sobic009G161100 Sobic001G472000--Sobic009G161100 Sobic009G070600 Sobic009G070600 Sobic001G472000--Sobic009G070600 Sobic001G472000--Sobic001G255300 Sobic001G315200 Sobic001G315200 Sobic001G472000--Sobic001G315200 Sobic001G541300 Sobic001G541300 Sobic001G472000--Sobic001G541300 Sobic004G249400 Sobic004G249400 Sobic001G472000--Sobic004G249400 Sobic008G189500--Sobic003G007800 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic008G189500--Sobic009G070600 Sobic008G189500--Sobic004G328900 Sobic008G189500--Sobic003G317800 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic004G335500 Sobic004G335500 Sobic001G068600--Sobic004G335500 Sobic001G068600--Sobic008G189500 Sobic001G068600--Sobic003G007800 Sobic001G068600--Sobic006G175700 Sobic001G363700 Sobic001G363700 Sobic001G068600--Sobic001G363700 Sobic001G068600--Sobic005G029400 Sobic008G030700 Sobic008G030700 Sobic001G068600--Sobic008G030700 Sobic001G068600--Sobic005G190800 Sobic001G068600--Sobic002G128600 Sobic005G029400--Sobic008G189500 Sobic005G029400--Sobic001G255300 Sobic005G029400--Sobic009G070600 Sobic005G029400--Sobic003G007800 Sobic005G029400--Sobic001G379300 Sobic005G029400--Sobic007G069500 Sobic005G029400--Sobic002G128600 Sobic005G029400--Sobic003G317800 Sobic005G029400--Sobic004G328900 Sobic005G218201--Sobic005G218600 Sobic004G044200 Sobic004G044200 Sobic005G218201--Sobic004G044200 Sobic002G209800 Sobic002G209800 Sobic005G218201--Sobic002G209800 Sobic005G218201--Sobic004G038300 Sobic003G120500 Sobic003G120500 Sobic005G218201--Sobic003G120500 Sobic005G200600 Sobic005G200600 Sobic005G218201--Sobic005G200600 Sobic006G238100 Sobic006G238100 Sobic005G218201--Sobic006G238100 Sobic005G218201--Sobic001G541300 Sobic005G218201--Sobic001G255300 Sobic005G218600--Sobic005G218201 Sobic005G218600--Sobic004G038300 Sobic005G218600--Sobic001G255300 Sobic005G218600--Sobic001G379300 Sobic005G218600--Sobic006G238100 Sobic005G218600--Sobic004G044200 Sobic005G218600--Sobic002G209800 Sobic008G163200 Sobic008G163200 Sobic005G218600--Sobic008G163200 Sobic003G068300 Sobic003G068300 Sobic005G218600--Sobic003G068300 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic002G416950 Sobic002G416950 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic001G255300--Sobic008G189500 Sobic001G255300--Sobic003G068300
Octagon: transcription factors


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