Gene annotation
Transcriptome id Sobic.009G161100.2,Sobic.009G161100.1
Synonym Sb09g022370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1B6P9I7 , A0A1Z5R3X3
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF222
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37770 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os05g38230.2 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a043891
Brachypodium -
Barley -
Wheat TraesCS1B02G291500 , TraesCS1D02G281800 , TraesCS1A02G282600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
2 Sobic.005G200600 dirigent, putative, expressed -
3 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
5 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
9 Sobic.001G315200 expressed protein -
10 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
11 Sobic.005G218201 - -
12 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G253800 - -
14 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
15 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
16 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
17 Sobic.005G080050 - -
18 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.005G029400 strictosidine synthase, putative, expressed -
20 Sobic.001G453200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic009G161100 Sobic009G161100 Sobic001G472000 Sobic001G472000 Sobic009G161100--Sobic001G472000 Sobic005G200600 Sobic005G200600 Sobic009G161100--Sobic005G200600 Sobic002G141100 Sobic002G141100 Sobic009G161100--Sobic002G141100 Sobic005G218600 Sobic005G218600 Sobic009G161100--Sobic005G218600 Sobic004G249400 Sobic004G249400 Sobic009G161100--Sobic004G249400 Sobic001G541300 Sobic001G541300 Sobic009G161100--Sobic001G541300 Sobic006G238100 Sobic006G238100 Sobic009G161100--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic009G161100--Sobic002G209800 Sobic001G315200 Sobic001G315200 Sobic009G161100--Sobic001G315200 Sobic008G189500 Sobic008G189500 Sobic001G472000--Sobic008G189500 Sobic003G007800 Sobic003G007800 Sobic001G472000--Sobic003G007800 Sobic005G029400 Sobic005G029400 Sobic001G472000--Sobic005G029400 Sobic001G472000--Sobic009G161100 Sobic009G070600 Sobic009G070600 Sobic001G472000--Sobic009G070600 Sobic001G255300 Sobic001G255300 Sobic001G472000--Sobic001G255300 Sobic001G472000--Sobic001G315200 Sobic001G472000--Sobic001G541300 Sobic001G472000--Sobic004G249400 Sobic005G200600--Sobic006G238100 Sobic005G200600--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic005G200600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic005G200600--Sobic002G416950 Sobic009G059100 Sobic009G059100 Sobic005G200600--Sobic009G059100 Sobic005G200600--Sobic004G249400 Sobic007G009600 Sobic007G009600 Sobic005G200600--Sobic007G009600 Sobic005G200600--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic005G200600--Sobic001G379300 Sobic002G141100--Sobic001G541300 Sobic002G141100--Sobic005G200600 Sobic007G170800 Sobic007G170800 Sobic002G141100--Sobic007G170800 Sobic002G141100--Sobic004G060700 Sobic002G141100--Sobic002G416950 Sobic002G141100--Sobic006G238100 Sobic002G141100--Sobic007G009600 Sobic003G114200 Sobic003G114200 Sobic002G141100--Sobic003G114200 Sobic002G141100--Sobic001G379300 Sobic005G218201 Sobic005G218201 Sobic005G218600--Sobic005G218201 Sobic004G038300 Sobic004G038300 Sobic005G218600--Sobic004G038300 Sobic005G218600--Sobic001G255300 Sobic005G218600--Sobic001G379300 Sobic005G218600--Sobic006G238100 Sobic004G044200 Sobic004G044200 Sobic005G218600--Sobic004G044200 Sobic005G218600--Sobic002G209800 Sobic008G163200 Sobic008G163200 Sobic005G218600--Sobic008G163200 Sobic003G068300 Sobic003G068300 Sobic005G218600--Sobic003G068300 Sobic001G453200 Sobic001G453200 Sobic004G249400--Sobic001G453200 Sobic004G249400--Sobic001G541300 Sobic004G249400--Sobic002G141100 Sobic004G249400--Sobic005G200600 Sobic002G207900 Sobic002G207900 Sobic004G249400--Sobic002G207900 Sobic007G127600 Sobic007G127600 Sobic004G249400--Sobic007G127600 Sobic004G249400--Sobic006G238100 Sobic003G120500 Sobic003G120500 Sobic004G249400--Sobic003G120500 Sobic004G249400--Sobic003G114200 Sobic001G541300--Sobic002G141100 Sobic001G541300--Sobic003G114200 Sobic001G541300--Sobic007G170800 Sobic001G541300--Sobic002G416950 Sobic001G541300--Sobic004G060700 Sobic001G541300--Sobic006G238100 Sobic001G541300--Sobic004G249400 Sobic001G541300--Sobic001G379300 Sobic001G541300--Sobic007G009600 Sobic006G238100--Sobic001G379300 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic006G238100--Sobic001G255300 Sobic006G238100--Sobic005G200600 Sobic006G238100--Sobic007G009600 Sobic002G415300 Sobic002G415300 Sobic006G238100--Sobic002G415300 Sobic006G238100--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic006G238100--Sobic002G415400 Sobic002G209800--Sobic004G038300 Sobic002G209800--Sobic006G238100 Sobic002G209800--Sobic004G249400 Sobic009G215600 Sobic009G215600 Sobic002G209800--Sobic009G215600 Sobic002G209800--Sobic001G255300 Sobic002G209800--Sobic005G218600 Sobic002G209800--Sobic005G200600 Sobic002G209800--Sobic001G379300 Sobic002G209800--Sobic002G141100 Sobic001G315200--Sobic001G472000 Sobic009G070800 Sobic009G070800 Sobic001G315200--Sobic009G070800 Sobic001G315200--Sobic009G161100 Sobic009G009500 Sobic009G009500 Sobic001G315200--Sobic009G009500 Sobic001G315200--Sobic008G189500 Sobic002G107000 Sobic002G107000 Sobic001G315200--Sobic002G107000 Sobic009G000900 Sobic009G000900 Sobic001G315200--Sobic009G000900 Sobic001G315200--Sobic003G007800 Sobic004G007500 Sobic004G007500 Sobic001G315200--Sobic004G007500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.