Gene annotation
Transcriptome id Sobic.009G251100.2
Synonym Sb09g030170, TTL1
Functional annotation TTL1, putative, expressed
UniProt A0A1Z5R505
Pfam PF00085 PF13414
Panther DB PTHR22904 PTHR22904:SF329
NCBI CDD KOG0548; Molecular co-chaperone STI1 KOG0907Thioredoxin
KEGG Orthology K09527; DnaJ homolog subfamily C member 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53300 : tetratricopetide-repeat thioredoxin-like 1
RAP-DB (Rice) LOC_Os01g42960.1 : TTL1, putative, expressed
MaizeGDB (Corn) Zm00025a036750 , Zm00025a038509
Brachypodium KQK08729 , KQK04621 , KQK04620 , KQK04622 , KQK04624
Barley HORVU3Hr1G054240.2 , HORVU3Hr1G054240.3 , HORVU3Hr1G054240.1 , HORVU3Hr1G054240.6 , HORVU3Hr1G054240.7 , HORVU3Hr1G054240.4 , HORVU3Hr1G054240.5 , HORVU3Hr1G054240.8 , HORVU3Hr1G054240.9 , HORVU3Hr1G054240.10 , HORVU3Hr1G054240.12 , HORVU3Hr1G054240.13 , HORVU3Hr1G054240.14 , HORVU3Hr1G054240.15 , HORVU1Hr1G093390.3 , HORVU1Hr1G093390.2 , HORVU1Hr1G093390.6 , HORVU1Hr1G093390.5
Wheat TraesCS1B02G462300 , TraesCS1D02G437100 , TraesCS1D02G437100 , TraesCS1A02G427400
Populus -


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cDNA sequences
Sobic.009G251100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G296300 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
2 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
3 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
4 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
5 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
6 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
7 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
8 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
9 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.010G243000 protein kinase domain containing protein, expressed -
11 Sobic.003G017500 TTL1, putative, expressed -
12 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
13 Sobic.001G159800 KIP1, putative, expressed -
14 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.007G130900 expressed protein -
16 Sobic.001G037400 expressed protein -
17 Sobic.010G090500 expressed protein -
18 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
19 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic009G251100 Sobic009G251100 Sobic004G296300 Sobic004G296300 Sobic009G251100--Sobic004G296300 Sobic010G120300 Sobic010G120300 Sobic009G251100--Sobic010G120300 Sobic010G096100 Sobic010G096100 Sobic009G251100--Sobic010G096100 Sobic003G419600 Sobic003G419600 Sobic009G251100--Sobic003G419600 Sobic001G196000 Sobic001G196000 Sobic009G251100--Sobic001G196000 Sobic001G073150 Sobic001G073150 Sobic009G251100--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic009G251100--Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic009G251100--Sobic001G437500 Sobic009G063400 Sobic009G063400 Sobic009G251100--Sobic009G063400 Sobic004G296300--Sobic009G251100 Sobic007G130900 Sobic007G130900 Sobic004G296300--Sobic007G130900 Sobic004G296300--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic004G296300--Sobic007G139500 Sobic004G296300--Sobic010G096100 Sobic003G017500 Sobic003G017500 Sobic004G296300--Sobic003G017500 Sobic008G174900 Sobic008G174900 Sobic004G296300--Sobic008G174900 Sobic004G296300--Sobic010G120300 Sobic007G079600 Sobic007G079600 Sobic004G296300--Sobic007G079600 Sobic010G120300--Sobic001G073150 Sobic010G090500 Sobic010G090500 Sobic010G120300--Sobic010G090500 Sobic010G120300--Sobic009G251100 Sobic001G159800 Sobic001G159800 Sobic010G120300--Sobic001G159800 Sobic010G120300--Sobic008G174900 Sobic001G131700 Sobic001G131700 Sobic010G120300--Sobic001G131700 Sobic003G267000 Sobic003G267000 Sobic010G120300--Sobic003G267000 Sobic009G125900 Sobic009G125900 Sobic010G120300--Sobic009G125900 Sobic001G021500 Sobic001G021500 Sobic010G120300--Sobic001G021500 Sobic006G075000 Sobic006G075000 Sobic010G096100--Sobic006G075000 Sobic001G208600 Sobic001G208600 Sobic010G096100--Sobic001G208600 Sobic010G096100--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic010G096100--Sobic009G026101 Sobic010G096100--Sobic009G125900 Sobic009G017500 Sobic009G017500 Sobic010G096100--Sobic009G017500 Sobic010G096100--Sobic009G251100 Sobic001G484000 Sobic001G484000 Sobic010G096100--Sobic001G484000 Sobic010G114000 Sobic010G114000 Sobic010G096100--Sobic010G114000 Sobic005G130700 Sobic005G130700 Sobic003G419600--Sobic005G130700 Sobic010G007000 Sobic010G007000 Sobic003G419600--Sobic010G007000 Sobic005G110600 Sobic005G110600 Sobic003G419600--Sobic005G110600 Sobic006G062300 Sobic006G062300 Sobic003G419600--Sobic006G062300 Sobic001G037400 Sobic001G037400 Sobic003G419600--Sobic001G037400 Sobic003G277200 Sobic003G277200 Sobic003G419600--Sobic003G277200 Sobic007G111700 Sobic007G111700 Sobic003G419600--Sobic007G111700 Sobic003G006100 Sobic003G006100 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic009G206500 Sobic009G206500 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G196000--Sobic001G159800 Sobic001G073150--Sobic010G120300 Sobic001G073150--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic001G073150--Sobic010G096100 Sobic001G073150--Sobic009G125900 Sobic001G073150--Sobic009G251100 Sobic001G073150--Sobic001G159800 Sobic001G073150--Sobic008G174900 Sobic004G243800--Sobic001G437500 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic009G211800 Sobic009G211800 Sobic004G243800--Sobic009G211800 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic001G437500--Sobic001G196000 Sobic001G437500--Sobic004G243800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic001G437500--Sobic002G276600 Sobic009G063400--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic009G063400--Sobic002G075500 Sobic009G063400--Sobic009G026101 Sobic002G118700 Sobic002G118700 Sobic009G063400--Sobic002G118700 Sobic009G063400--Sobic010G096100 Sobic001G334900 Sobic001G334900 Sobic009G063400--Sobic001G334900 Sobic009G063400--Sobic010G090500 Sobic009G063400--Sobic001G208600 Sobic009G063400--Sobic006G075000
Octagon: transcription factors


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