Gene annotation
Transcriptome id Sobic.008G097500.1
Synonym Sb08g014880
Functional annotation expressed protein
UniProt A0A1B6PD44
Pfam -
Panther DB PTHR36885 PTHR36885:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g35080.1 : expressed protein
MaizeGDB (Corn) Zm00025a024838
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
2 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
3 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.001G316000 protein kinase domain containing protein, expressed -
5 Sobic.002G312700 myosin heavy chain-related, putative, expressed -
6 Sobic.003G056000 staphylococcal nuclease homologue, putative, expressed -
7 Sobic.003G286800 expressed protein -
8 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
9 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
10 Sobic.004G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
11 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
12 Sobic.008G072600 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
13 Sobic.010G090500 expressed protein -
14 Sobic.002G385800 CSLA7 - cellulose synthase-like family A@ mannan synthase, expressed -
15 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
16 Sobic.001G070401 - -
17 Sobic.001G012700 regulatory protein, putative, expressed -
18 Sobic.002G107400 aldehyde oxidase, putative, expressed -
19 Sobic.008G108950 - -
20 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)


Gene co-expression network
sample Sobic008G097500 Sobic008G097500 Sobic010G022400 Sobic010G022400 Sobic008G097500--Sobic010G022400 Sobic004G034200 Sobic004G034200 Sobic008G097500--Sobic004G034200 Sobic003G134900 Sobic003G134900 Sobic008G097500--Sobic003G134900 Sobic001G316000 Sobic001G316000 Sobic008G097500--Sobic001G316000 Sobic002G312700 Sobic002G312700 Sobic008G097500--Sobic002G312700 Sobic003G056000 Sobic003G056000 Sobic008G097500--Sobic003G056000 Sobic003G286800 Sobic003G286800 Sobic008G097500--Sobic003G286800 Sobic003G198500 Sobic003G198500 Sobic008G097500--Sobic003G198500 Sobic001G336700 Sobic001G336700 Sobic008G097500--Sobic001G336700 Sobic001G406700 Sobic001G406700 Sobic010G022400--Sobic001G406700 Sobic003G387500 Sobic003G387500 Sobic010G022400--Sobic003G387500 Sobic010G022400--Sobic001G336700 Sobic010G180100 Sobic010G180100 Sobic010G022400--Sobic010G180100 Sobic009G226900 Sobic009G226900 Sobic010G022400--Sobic009G226900 Sobic009G170500 Sobic009G170500 Sobic010G022400--Sobic009G170500 Sobic002G167600 Sobic002G167600 Sobic010G022400--Sobic002G167600 Sobic005G107500 Sobic005G107500 Sobic010G022400--Sobic005G107500 Sobic002G254900 Sobic002G254900 Sobic010G022400--Sobic002G254900 Sobic005G089200 Sobic005G089200 Sobic004G034200--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic004G034200--Sobic005G149600 Sobic001G026300 Sobic001G026300 Sobic004G034200--Sobic001G026300 Sobic004G108800 Sobic004G108800 Sobic004G034200--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic004G034200--Sobic007G156800 Sobic003G015200 Sobic003G015200 Sobic004G034200--Sobic003G015200 Sobic008G091557 Sobic008G091557 Sobic004G034200--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic004G034200--Sobic001G131001 Sobic007G038600 Sobic007G038600 Sobic004G034200--Sobic007G038600 Sobic010G243000 Sobic010G243000 Sobic003G134900--Sobic010G243000 Sobic009G144200 Sobic009G144200 Sobic003G134900--Sobic009G144200 Sobic005G116500 Sobic005G116500 Sobic003G134900--Sobic005G116500 Sobic009G221900 Sobic009G221900 Sobic003G134900--Sobic009G221900 Sobic009G232200 Sobic009G232200 Sobic003G134900--Sobic009G232200 Sobic003G136600 Sobic003G136600 Sobic003G134900--Sobic003G136600 Sobic004G257700 Sobic004G257700 Sobic003G134900--Sobic004G257700 Sobic009G251100 Sobic009G251100 Sobic003G134900--Sobic009G251100 Sobic003G134900--Sobic008G097500 Sobic003G161500 Sobic003G161500 Sobic001G316000--Sobic003G161500 Sobic001G316000--Sobic008G097500 Sobic001G316000--Sobic010G022400 Sobic001G316000--Sobic009G226900 Sobic004G243800 Sobic004G243800 Sobic001G316000--Sobic004G243800 Sobic007G001900 Sobic007G001900 Sobic001G316000--Sobic007G001900 Sobic001G316000--Sobic001G336700 Sobic010G090500 Sobic010G090500 Sobic001G316000--Sobic010G090500 Sobic001G316000--Sobic003G134900 Sobic007G172500 Sobic007G172500 Sobic002G312700--Sobic007G172500 Sobic002G312700--Sobic003G198500 Sobic006G109500 Sobic006G109500 Sobic002G312700--Sobic006G109500 Sobic005G022500 Sobic005G022500 Sobic002G312700--Sobic005G022500 Sobic002G312700--Sobic010G090500 Sobic009G079100 Sobic009G079100 Sobic002G312700--Sobic009G079100 Sobic007G106500 Sobic007G106500 Sobic002G312700--Sobic007G106500 Sobic004G161200 Sobic004G161200 Sobic002G312700--Sobic004G161200 Sobic002G312700--Sobic008G097500 Sobic003G055900 Sobic003G055900 Sobic003G056000--Sobic003G055900 Sobic003G056000--Sobic004G034200 Sobic002G107400 Sobic002G107400 Sobic003G056000--Sobic002G107400 Sobic010G170300 Sobic010G170300 Sobic003G056000--Sobic010G170300 Sobic004G038200 Sobic004G038200 Sobic003G056000--Sobic004G038200 Sobic009G006500 Sobic009G006500 Sobic003G056000--Sobic009G006500 Sobic004G126700 Sobic004G126700 Sobic003G056000--Sobic004G126700 Sobic003G056000--Sobic001G026300 Sobic003G444200 Sobic003G444200 Sobic003G056000--Sobic003G444200 Sobic003G286800--Sobic008G097500 Sobic003G286800--Sobic006G109500 Sobic007G099966 Sobic007G099966 Sobic003G286800--Sobic007G099966 Sobic001G131700 Sobic001G131700 Sobic003G286800--Sobic001G131700 Sobic003G286800--Sobic002G312700 Sobic003G286800--Sobic003G161500 Sobic005G183200 Sobic005G183200 Sobic003G286800--Sobic005G183200 Sobic002G247200 Sobic002G247200 Sobic003G286800--Sobic002G247200 Sobic003G286800--Sobic009G079100 Sobic003G198500--Sobic009G079100 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic003G198500--Sobic002G312700 Sobic004G051300 Sobic004G051300 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800 Sobic002G082300 Sobic002G082300 Sobic001G336700--Sobic002G082300 Sobic001G336700--Sobic010G022400 Sobic001G336700--Sobic009G226900 Sobic002G205500 Sobic002G205500 Sobic001G336700--Sobic002G205500 Sobic006G226200 Sobic006G226200 Sobic001G336700--Sobic006G226200 Sobic001G336700--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic001G336700--Sobic009G048000 Sobic005G087200 Sobic005G087200 Sobic001G336700--Sobic005G087200 Sobic003G296400 Sobic003G296400 Sobic001G336700--Sobic003G296400
Octagon: transcription factors


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