Gene annotation
Transcriptome id Sobic.008G072600.1
Synonym Sb08g006410
Functional annotation plant-specific domain TIGR01627 family protein, expressed
UniProt C5YTK8
Pfam PF04669
Panther DB PTHR31444 PTHR31444:SF2
NCBI CDD -
KEGG Orthology K18801; glucuronoxylan 4-O-methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33800 : Protein of unknown function (DUF579)
RAP-DB (Rice) LOC_Os12g10320.1 : plant-specific domain TIGR01627 family protein, expressed
MaizeGDB (Corn) Zm00025a054444 , Zm00025a025643
Brachypodium KQJ91897
Barley HORVU7Hr1G120340.1 , HORVU5Hr1G080580.1 , HORVU0Hr1G015370.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
2 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
3 Sobic.008G091557 - -
4 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
7 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
8 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
9 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
10 Sobic.009G125300 phospholipase, putative, expressed -
11 Sobic.001G208600 receptor kinase like protein, putative, expressed -
12 Sobic.008G133000 expressed protein -
13 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
14 Sobic.002G216000 Up-reguralion under drought(PubMedID : 24916767)@OsSub57 - Putative Subtilisin homologue, expressed -
15 Sobic.005G071800 - -
16 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
17 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
19 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
20 Sobic.002G030800 app1, putative, expressed -


Gene co-expression network
sample Sobic008G072600 Sobic008G072600 Sobic006G256200 Sobic006G256200 Sobic008G072600--Sobic006G256200 Sobic009G017500 Sobic009G017500 Sobic008G072600--Sobic009G017500 Sobic008G091557 Sobic008G091557 Sobic008G072600--Sobic008G091557 Sobic009G221900 Sobic009G221900 Sobic008G072600--Sobic009G221900 Sobic009G063400 Sobic009G063400 Sobic008G072600--Sobic009G063400 Sobic005G107500 Sobic005G107500 Sobic008G072600--Sobic005G107500 Sobic007G038600 Sobic007G038600 Sobic008G072600--Sobic007G038600 Sobic001G263900 Sobic001G263900 Sobic008G072600--Sobic001G263900 Sobic010G096100 Sobic010G096100 Sobic008G072600--Sobic010G096100 Sobic006G256200--Sobic008G072600 Sobic006G256200--Sobic009G221900 Sobic006G256200--Sobic008G091557 Sobic006G256200--Sobic009G017500 Sobic006G249400 Sobic006G249400 Sobic006G256200--Sobic006G249400 Sobic002G083600 Sobic002G083600 Sobic006G256200--Sobic002G083600 Sobic001G208600 Sobic001G208600 Sobic006G256200--Sobic001G208600 Sobic005G071800 Sobic005G071800 Sobic006G256200--Sobic005G071800 Sobic005G115600 Sobic005G115600 Sobic006G256200--Sobic005G115600 Sobic009G017500--Sobic001G208600 Sobic009G017500--Sobic001G263900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic009G017500--Sobic008G072600 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic004G034200 Sobic004G034200 Sobic008G091557--Sobic004G034200 Sobic008G091557--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic008G091557--Sobic008G133000 Sobic008G091557--Sobic009G221900 Sobic001G131001 Sobic001G131001 Sobic008G091557--Sobic001G131001 Sobic008G091557--Sobic005G107500 Sobic008G091557--Sobic008G072600 Sobic009G125300 Sobic009G125300 Sobic008G091557--Sobic009G125300 Sobic008G091557--Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G221900--Sobic009G017500 Sobic009G221900--Sobic003G099166 Sobic003G371400 Sobic003G371400 Sobic009G221900--Sobic003G371400 Sobic009G221900--Sobic008G091557 Sobic009G221900--Sobic001G208600 Sobic009G221900--Sobic002G030800 Sobic002G207000 Sobic002G207000 Sobic009G221900--Sobic002G207000 Sobic009G125900 Sobic009G125900 Sobic009G063400--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic009G063400--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic009G063400--Sobic009G026101 Sobic002G118700 Sobic002G118700 Sobic009G063400--Sobic002G118700 Sobic009G063400--Sobic010G096100 Sobic001G334900 Sobic001G334900 Sobic009G063400--Sobic001G334900 Sobic010G090500 Sobic010G090500 Sobic009G063400--Sobic010G090500 Sobic009G063400--Sobic001G208600 Sobic009G063400--Sobic006G075000 Sobic001G002800 Sobic001G002800 Sobic005G107500--Sobic001G002800 Sobic006G117500 Sobic006G117500 Sobic005G107500--Sobic006G117500 Sobic002G254900 Sobic002G254900 Sobic005G107500--Sobic002G254900 Sobic005G107500--Sobic008G133000 Sobic003G287200 Sobic003G287200 Sobic005G107500--Sobic003G287200 Sobic005G089200 Sobic005G089200 Sobic005G107500--Sobic005G089200 Sobic005G104200 Sobic005G104200 Sobic005G107500--Sobic005G104200 Sobic001G503000 Sobic001G503000 Sobic005G107500--Sobic001G503000 Sobic010G096700 Sobic010G096700 Sobic005G107500--Sobic010G096700 Sobic007G038600--Sobic004G034200 Sobic007G038600--Sobic008G091557 Sobic007G038600--Sobic001G131001 Sobic007G106500 Sobic007G106500 Sobic007G038600--Sobic007G106500 Sobic004G108800 Sobic004G108800 Sobic007G038600--Sobic004G108800 Sobic004G156250 Sobic004G156250 Sobic007G038600--Sobic004G156250 Sobic007G038500 Sobic007G038500 Sobic007G038600--Sobic007G038500 Sobic007G038600--Sobic006G117500 Sobic009G015166 Sobic009G015166 Sobic007G038600--Sobic009G015166 Sobic001G263900--Sobic009G221900 Sobic001G263900--Sobic003G099166 Sobic001G250100 Sobic001G250100 Sobic001G263900--Sobic001G250100 Sobic001G263900--Sobic009G017500 Sobic002G383900 Sobic002G383900 Sobic001G263900--Sobic002G383900 Sobic001G263900--Sobic002G030800 Sobic001G471800 Sobic001G471800 Sobic001G263900--Sobic001G471800 Sobic002G085800 Sobic002G085800 Sobic001G263900--Sobic002G085800 Sobic007G047300 Sobic007G047300 Sobic001G263900--Sobic007G047300 Sobic010G096100--Sobic006G075000 Sobic010G096100--Sobic001G208600 Sobic010G096100--Sobic009G063400 Sobic010G096100--Sobic009G026101 Sobic010G096100--Sobic009G125900 Sobic010G096100--Sobic009G017500 Sobic009G251100 Sobic009G251100 Sobic010G096100--Sobic009G251100 Sobic001G484000 Sobic001G484000 Sobic010G096100--Sobic001G484000 Sobic010G114000 Sobic010G114000 Sobic010G096100--Sobic010G114000
Octagon: transcription factors


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