Hb_168711_010

Information

Type -
Description -
Location Contig168711: 1101-1711
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa011748mg
description hypothetical protein
nr
ID XP_011069913.1
description PREDICTED: (DL)-glycerol-3-phosphatase 2 [Sesamum indicum]
swissprot
ID F4JTE7
description (DL)-glycerol-3-phosphatase 1 OS=Arabidopsis thaliana GN=GPP1 PE=1 SV=1
trembl
ID M5Y5A7
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011748mg PE=4 SV=1
Gene Ontology
ID GO:0016787
description -glycerol-3-phosphatase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168711_010 0.0 - - PREDICTED: (DL)-glycerol-3-phosphatase 2 [Sesamum indicum]
2 Hb_008887_040 0.1223417875 - - Ribonuclease P family protein / Rpp14 family protein isoform 1 [Theobroma cacao]
3 Hb_000635_080 0.126615024 - - 60S ribosomal protein L17A [Hevea brasiliensis]
4 Hb_002260_020 0.1301779335 - - -
5 Hb_002248_100 0.1327943825 - - hypothetical protein VITISV_027197 [Vitis vinifera]
6 Hb_000172_420 0.1337617869 - - 60S ribosomal protein L30, putative [Ricinus communis]
7 Hb_001434_070 0.1360245165 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Jatropha curcas]
8 Hb_000780_210 0.1373567961 - - PREDICTED: transmembrane protein 256 homolog [Jatropha curcas]
9 Hb_183086_040 0.1389705564 - - cytochrome b5 isoform Cb5-A [Vernicia fordii]
10 Hb_001377_380 0.1402195721 - - PREDICTED: uncharacterized protein LOC105642831 [Jatropha curcas]
11 Hb_003349_070 0.1406155087 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
12 Hb_000613_170 0.1431520086 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
13 Hb_004209_030 0.1438706608 - - PREDICTED: (DL)-glycerol-3-phosphatase 2 isoform X1 [Jatropha curcas]
14 Hb_000032_350 0.1453026366 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000789_110 0.1480751844 - - RecName: Full=Profilin-1; AltName: Full=Pollen allergen Hev b 8.0101; AltName: Allergen=Hev b 8.0101 [Hevea brasiliensis]
16 Hb_007943_140 0.1487268917 - - PREDICTED: uncharacterized protein LOC103340977 [Prunus mume]
17 Hb_000215_180 0.1535319102 - - hypothetical protein 17 [Hevea brasiliensis]
18 Hb_004223_260 0.1538239071 - - hypothetical protein F383_09277 [Gossypium arboreum]
19 Hb_010827_020 0.1543148111 - - 60S ribosomal protein L17B [Hevea brasiliensis]
20 Hb_001623_430 0.1562993244 - - PREDICTED: small acidic protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_168711_010 Hb_168711_010 Hb_008887_040 Hb_008887_040 Hb_168711_010--Hb_008887_040 Hb_000635_080 Hb_000635_080 Hb_168711_010--Hb_000635_080 Hb_002260_020 Hb_002260_020 Hb_168711_010--Hb_002260_020 Hb_002248_100 Hb_002248_100 Hb_168711_010--Hb_002248_100 Hb_000172_420 Hb_000172_420 Hb_168711_010--Hb_000172_420 Hb_001434_070 Hb_001434_070 Hb_168711_010--Hb_001434_070 Hb_000270_720 Hb_000270_720 Hb_008887_040--Hb_000270_720 Hb_004755_030 Hb_004755_030 Hb_008887_040--Hb_004755_030 Hb_000789_110 Hb_000789_110 Hb_008887_040--Hb_000789_110 Hb_000159_070 Hb_000159_070 Hb_008887_040--Hb_000159_070 Hb_008887_040--Hb_002260_020 Hb_001377_380 Hb_001377_380 Hb_000635_080--Hb_001377_380 Hb_000780_210 Hb_000780_210 Hb_000635_080--Hb_000780_210 Hb_000635_080--Hb_002248_100 Hb_006588_080 Hb_006588_080 Hb_000635_080--Hb_006588_080 Hb_004545_130 Hb_004545_130 Hb_000635_080--Hb_004545_130 Hb_002316_120 Hb_002316_120 Hb_000635_080--Hb_002316_120 Hb_080477_060 Hb_080477_060 Hb_002260_020--Hb_080477_060 Hb_008705_090 Hb_008705_090 Hb_002260_020--Hb_008705_090 Hb_003349_070 Hb_003349_070 Hb_002260_020--Hb_003349_070 Hb_030954_020 Hb_030954_020 Hb_002260_020--Hb_030954_020 Hb_002248_100--Hb_000172_420 Hb_007943_140 Hb_007943_140 Hb_002248_100--Hb_007943_140 Hb_002248_100--Hb_006588_080 Hb_010827_020 Hb_010827_020 Hb_002248_100--Hb_010827_020 Hb_172221_010 Hb_172221_010 Hb_002248_100--Hb_172221_010 Hb_000172_420--Hb_006588_080 Hb_000062_390 Hb_000062_390 Hb_000172_420--Hb_000062_390 Hb_000172_420--Hb_000635_080 Hb_000172_420--Hb_000270_720 Hb_008948_050 Hb_008948_050 Hb_000172_420--Hb_008948_050 Hb_004209_030 Hb_004209_030 Hb_001434_070--Hb_004209_030 Hb_000260_200 Hb_000260_200 Hb_001434_070--Hb_000260_200 Hb_001434_070--Hb_000635_080 Hb_003376_290 Hb_003376_290 Hb_001434_070--Hb_003376_290 Hb_001434_070--Hb_004545_130 Hb_001434_070--Hb_000172_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.76007 2.42148 6.90189 5.68651 8.19894 10.7431
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
67.7327 77.8592 19.8008 10.808 0.829044

CAGE analysis