Hb_160459_030

Information

Type -
Description -
Location Contig160459: 11551-12045
Sequence    

Annotation

kegg
ID rcu:RCOM_0152090
description hypothetical protein
nr
ID XP_012089817.1
description PREDICTED: uncharacterized protein LOC105648122 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9B8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01512 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_160459_030 0.0 - - PREDICTED: uncharacterized protein LOC105648122 [Jatropha curcas]
2 Hb_000181_450 0.1329906784 - - hypothetical protein JCGZ_20984 [Jatropha curcas]
3 Hb_004195_030 0.1405746983 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
4 Hb_007313_050 0.1419508647 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
5 Hb_021443_020 0.1439376847 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
6 Hb_001934_010 0.1456186482 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_001059_050 0.1490410087 - - PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Jatropha curcas]
8 Hb_001213_080 0.1507105674 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
9 Hb_055993_010 0.1559463232 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]
10 Hb_000286_210 0.156146752 - - hypothetical protein EUGRSUZ_C00018 [Eucalyptus grandis]
11 Hb_006550_010 0.1641878582 - - PREDICTED: vacuolar amino acid transporter 1 [Eucalyptus grandis]
12 Hb_000221_070 0.1651844637 - - conserved hypothetical protein [Ricinus communis]
13 Hb_151616_010 0.1679815052 - - -
14 Hb_001610_050 0.1688618683 - - PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
15 Hb_132517_010 0.170115937 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]
16 Hb_000991_110 0.1713657497 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
17 Hb_005389_090 0.1771496069 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
18 Hb_035006_010 0.1774628486 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
19 Hb_005900_020 0.1798989121 - - -
20 Hb_003216_020 0.1805536464 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_160459_030 Hb_160459_030 Hb_000181_450 Hb_000181_450 Hb_160459_030--Hb_000181_450 Hb_004195_030 Hb_004195_030 Hb_160459_030--Hb_004195_030 Hb_007313_050 Hb_007313_050 Hb_160459_030--Hb_007313_050 Hb_021443_020 Hb_021443_020 Hb_160459_030--Hb_021443_020 Hb_001934_010 Hb_001934_010 Hb_160459_030--Hb_001934_010 Hb_001059_050 Hb_001059_050 Hb_160459_030--Hb_001059_050 Hb_002461_080 Hb_002461_080 Hb_000181_450--Hb_002461_080 Hb_000181_450--Hb_001934_010 Hb_000221_070 Hb_000221_070 Hb_000181_450--Hb_000221_070 Hb_008554_010 Hb_008554_010 Hb_000181_450--Hb_008554_010 Hb_002984_030 Hb_002984_030 Hb_000181_450--Hb_002984_030 Hb_131957_010 Hb_131957_010 Hb_004195_030--Hb_131957_010 Hb_005396_110 Hb_005396_110 Hb_004195_030--Hb_005396_110 Hb_132517_010 Hb_132517_010 Hb_004195_030--Hb_132517_010 Hb_087468_010 Hb_087468_010 Hb_004195_030--Hb_087468_010 Hb_004195_030--Hb_008554_010 Hb_007313_050--Hb_021443_020 Hb_001213_080 Hb_001213_080 Hb_007313_050--Hb_001213_080 Hb_003939_090 Hb_003939_090 Hb_007313_050--Hb_003939_090 Hb_007313_050--Hb_001059_050 Hb_035006_010 Hb_035006_010 Hb_007313_050--Hb_035006_010 Hb_000286_210 Hb_000286_210 Hb_007313_050--Hb_000286_210 Hb_021443_020--Hb_035006_010 Hb_021443_020--Hb_001059_050 Hb_021443_020--Hb_000286_210 Hb_001610_050 Hb_001610_050 Hb_021443_020--Hb_001610_050 Hb_001227_010 Hb_001227_010 Hb_021443_020--Hb_001227_010 Hb_001934_010--Hb_001610_050 Hb_001277_420 Hb_001277_420 Hb_001934_010--Hb_001277_420 Hb_001016_040 Hb_001016_040 Hb_001934_010--Hb_001016_040 Hb_183209_020 Hb_183209_020 Hb_001934_010--Hb_183209_020 Hb_001059_050--Hb_000286_210 Hb_151616_010 Hb_151616_010 Hb_001059_050--Hb_151616_010 Hb_001059_050--Hb_132517_010 Hb_001059_050--Hb_001213_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.02547 0.185571 1.20618 0 0.110121
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.223031 0

CAGE analysis