Hb_151290_010

Information

Type -
Description -
Location Contig151290: 139-683
Sequence    

Annotation

kegg
ID pxb:103944217
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410
nr
ID CBI25824.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q9LPZ3
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3
trembl
ID F6I7Q9
description Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_00s2549g00010 PE=4 SV=1
Gene Ontology
ID GO:0004672
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151290_010 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_000580_200 0.0593412756 - - PREDICTED: pectinesterase 2 isoform X1 [Jatropha curcas]
3 Hb_003786_030 0.0618256147 - - BnaUnng00830D [Brassica napus]
4 Hb_104014_020 0.0662853532 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
5 Hb_003025_170 0.0671848594 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 [Jatropha curcas]
6 Hb_135887_010 0.0707612457 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
7 Hb_000023_100 0.0732238269 - - Mechanosensitive channel of small conductance-like 10 [Theobroma cacao]
8 Hb_002973_060 0.0735113922 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000724_040 0.0808246919 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
10 Hb_001097_170 0.0829405989 - - PREDICTED: protein NDR1 [Jatropha curcas]
11 Hb_001053_120 0.08427317 transcription factor TF Family: MYB PREDICTED: transcription factor MYB46-like [Populus euphratica]
12 Hb_000077_040 0.0843701528 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
13 Hb_009158_040 0.0846596038 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
14 Hb_005228_050 0.0856216436 - - PREDICTED: uncharacterized protein LOC104896168 [Beta vulgaris subsp. vulgaris]
15 Hb_023342_010 0.0872532219 - - -
16 Hb_011108_010 0.0905400513 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103335582 [Prunus mume]
17 Hb_000115_030 0.0958968865 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
18 Hb_094439_040 0.0962158156 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
19 Hb_001163_010 0.0963627006 - - PREDICTED: syncoilin [Jatropha curcas]
20 Hb_000029_210 0.0976582863 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_151290_010 Hb_151290_010 Hb_000580_200 Hb_000580_200 Hb_151290_010--Hb_000580_200 Hb_003786_030 Hb_003786_030 Hb_151290_010--Hb_003786_030 Hb_104014_020 Hb_104014_020 Hb_151290_010--Hb_104014_020 Hb_003025_170 Hb_003025_170 Hb_151290_010--Hb_003025_170 Hb_135887_010 Hb_135887_010 Hb_151290_010--Hb_135887_010 Hb_000023_100 Hb_000023_100 Hb_151290_010--Hb_000023_100 Hb_000580_200--Hb_135887_010 Hb_000580_200--Hb_003786_030 Hb_009158_040 Hb_009158_040 Hb_000580_200--Hb_009158_040 Hb_023342_010 Hb_023342_010 Hb_000580_200--Hb_023342_010 Hb_000580_200--Hb_000023_100 Hb_000724_040 Hb_000724_040 Hb_003786_030--Hb_000724_040 Hb_002973_060 Hb_002973_060 Hb_003786_030--Hb_002973_060 Hb_003786_030--Hb_135887_010 Hb_005228_050 Hb_005228_050 Hb_003786_030--Hb_005228_050 Hb_011108_010 Hb_011108_010 Hb_003786_030--Hb_011108_010 Hb_003786_030--Hb_104014_020 Hb_104014_020--Hb_003025_170 Hb_000077_040 Hb_000077_040 Hb_104014_020--Hb_000077_040 Hb_104014_020--Hb_002973_060 Hb_001593_040 Hb_001593_040 Hb_104014_020--Hb_001593_040 Hb_000115_030 Hb_000115_030 Hb_104014_020--Hb_000115_030 Hb_003025_170--Hb_000077_040 Hb_003025_170--Hb_001593_040 Hb_003025_170--Hb_002973_060 Hb_064445_020 Hb_064445_020 Hb_003025_170--Hb_064445_020 Hb_002326_010 Hb_002326_010 Hb_003025_170--Hb_002326_010 Hb_135887_010--Hb_011108_010 Hb_135887_010--Hb_000724_040 Hb_135887_010--Hb_005228_050 Hb_005991_030 Hb_005991_030 Hb_135887_010--Hb_005991_030 Hb_000023_100--Hb_023342_010 Hb_000023_100--Hb_003786_030 Hb_001053_120 Hb_001053_120 Hb_000023_100--Hb_001053_120 Hb_000023_100--Hb_002973_060 Hb_000023_100--Hb_009158_040 Hb_000023_100--Hb_135887_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.91516 24.3537 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.198325 0 0 0.0667161 33.9791

CAGE analysis