Hb_150360_010

Information

Type -
Description -
Location Contig150360: 3-565
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP43603.1
description hypothetical protein JCGZ_16890 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L8N3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16890 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150360_010 0.0 - - hypothetical protein JCGZ_16890 [Jatropha curcas]
2 Hb_003656_140 0.0885238817 - - PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]
3 Hb_137403_010 0.0952880605 - - PREDICTED: actin-related protein 9 [Jatropha curcas]
4 Hb_041392_010 0.0985037701 - - PREDICTED: DNA-binding protein BIN4 [Jatropha curcas]
5 Hb_004934_070 0.1023939022 - - PREDICTED: U2 small nuclear ribonucleoprotein A' [Jatropha curcas]
6 Hb_000183_040 0.112533378 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
7 Hb_002374_020 0.1150238111 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
8 Hb_187739_020 0.1168676167 - - PREDICTED: B2 protein [Jatropha curcas]
9 Hb_012799_130 0.1171808518 - - PREDICTED: flap endonuclease GEN-like 2 [Jatropha curcas]
10 Hb_003912_090 0.1194740905 - - peptidyl-tRNA hydrolase, putative [Ricinus communis]
11 Hb_184570_010 0.1220582197 - - PREDICTED: COP9 signalosome complex subunit 8 [Jatropha curcas]
12 Hb_140291_010 0.1222762631 - - hypothetical protein JCGZ_17222 [Jatropha curcas]
13 Hb_006252_010 0.1229971845 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Jatropha curcas]
14 Hb_005862_010 0.123523107 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]
15 Hb_000416_070 0.1292941803 - - hypothetical protein JCGZ_21620 [Jatropha curcas]
16 Hb_002023_020 0.1334128007 - - PREDICTED: aladin isoform X2 [Jatropha curcas]
17 Hb_000991_070 0.1337785438 - - phytochrome A specific signal transduction component family protein [Populus trichocarpa]
18 Hb_001158_220 0.1340056704 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
19 Hb_096490_020 0.1352443311 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
20 Hb_002272_180 0.1353760727 - - hypothetical protein JCGZ_23380 [Jatropha curcas]

Gene co-expression network

sample Hb_150360_010 Hb_150360_010 Hb_003656_140 Hb_003656_140 Hb_150360_010--Hb_003656_140 Hb_137403_010 Hb_137403_010 Hb_150360_010--Hb_137403_010 Hb_041392_010 Hb_041392_010 Hb_150360_010--Hb_041392_010 Hb_004934_070 Hb_004934_070 Hb_150360_010--Hb_004934_070 Hb_000183_040 Hb_000183_040 Hb_150360_010--Hb_000183_040 Hb_002374_020 Hb_002374_020 Hb_150360_010--Hb_002374_020 Hb_002023_020 Hb_002023_020 Hb_003656_140--Hb_002023_020 Hb_003656_140--Hb_137403_010 Hb_003656_140--Hb_041392_010 Hb_187739_020 Hb_187739_020 Hb_003656_140--Hb_187739_020 Hb_000866_030 Hb_000866_030 Hb_003656_140--Hb_000866_030 Hb_137403_010--Hb_002023_020 Hb_002982_040 Hb_002982_040 Hb_137403_010--Hb_002982_040 Hb_000364_150 Hb_000364_150 Hb_137403_010--Hb_000364_150 Hb_005862_010 Hb_005862_010 Hb_137403_010--Hb_005862_010 Hb_033312_140 Hb_033312_140 Hb_041392_010--Hb_033312_140 Hb_023001_050 Hb_023001_050 Hb_041392_010--Hb_023001_050 Hb_000606_080 Hb_000606_080 Hb_041392_010--Hb_000606_080 Hb_150204_010 Hb_150204_010 Hb_041392_010--Hb_150204_010 Hb_004934_070--Hb_005862_010 Hb_000785_080 Hb_000785_080 Hb_004934_070--Hb_000785_080 Hb_004934_070--Hb_002374_020 Hb_003641_060 Hb_003641_060 Hb_004934_070--Hb_003641_060 Hb_004881_020 Hb_004881_020 Hb_004934_070--Hb_004881_020 Hb_144598_030 Hb_144598_030 Hb_004934_070--Hb_144598_030 Hb_050455_010 Hb_050455_010 Hb_000183_040--Hb_050455_010 Hb_000069_160 Hb_000069_160 Hb_000183_040--Hb_000069_160 Hb_000183_040--Hb_003656_140 Hb_000183_040--Hb_137403_010 Hb_000183_040--Hb_002023_020 Hb_002671_100 Hb_002671_100 Hb_002374_020--Hb_002671_100 Hb_002374_020--Hb_144598_030 Hb_001935_130 Hb_001935_130 Hb_002374_020--Hb_001935_130 Hb_005016_170 Hb_005016_170 Hb_002374_020--Hb_005016_170 Hb_002374_020--Hb_005862_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.3046 16.1241 16.5551 31.1618 39.8976 102.571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
51.2469 28.5835 12.3114 29.4828 8.97198

CAGE analysis