Hb_000183_040

Information

Type -
Description -
Location Contig183: 74989-83873
Sequence    

Annotation

kegg
ID rcu:RCOM_0852750
description mannose-1-phosphate guanyltransferase, putative (EC:2.7.7.13)
nr
ID XP_002517417.1
description mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
swissprot
ID Q86HG0
description Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1
trembl
ID B9RUH2
description Mannose-1-phosphate guanyltransferase, putative OS=Ricinus communis GN=RCOM_0852750 PE=4 SV=1
Gene Ontology
ID GO:0044444
description adp-glucose pyrophosphorylase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000183_040 0.0 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
2 Hb_050455_010 0.099268929 - - PREDICTED: prosaposin isoform X2 [Jatropha curcas]
3 Hb_000069_160 0.0997881826 - - -
4 Hb_003656_140 0.1033869663 - - PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]
5 Hb_137403_010 0.1058518866 - - PREDICTED: actin-related protein 9 [Jatropha curcas]
6 Hb_150360_010 0.112533378 - - hypothetical protein JCGZ_16890 [Jatropha curcas]
7 Hb_002023_020 0.1137642914 - - PREDICTED: aladin isoform X2 [Jatropha curcas]
8 Hb_185830_020 0.1149701198 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_012305_050 0.1173662857 - - unnamed protein product [Coffea canephora]
10 Hb_000849_070 0.1207564137 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
11 Hb_123475_010 0.1210190119 - - PREDICTED: hepatocyte growth factor-regulated tyrosine kinase substrate [Jatropha curcas]
12 Hb_006252_010 0.1222441552 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Jatropha curcas]
13 Hb_001279_140 0.1232194229 - - PREDICTED: cystinosin homolog [Jatropha curcas]
14 Hb_003847_080 0.123231398 - - PREDICTED: uncharacterized protein LOC105647792 isoform X3 [Jatropha curcas]
15 Hb_007317_190 0.1249344636 - - PREDICTED: WD-40 repeat-containing protein MSI1 [Jatropha curcas]
16 Hb_153054_010 0.1257577661 - - PREDICTED: metal tolerance protein 11-like [Populus euphratica]
17 Hb_000003_480 0.1275339004 - - PREDICTED: nuclear pore complex protein NUP35 [Jatropha curcas]
18 Hb_002982_040 0.1282791171 - - mta/sah nucleosidase, putative [Ricinus communis]
19 Hb_039253_010 0.1294510509 - - PREDICTED: zinc finger CCCH domain-containing protein 31 isoform X2 [Jatropha curcas]
20 Hb_022250_130 0.1298287461 - - inositol hexaphosphate kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000183_040 Hb_000183_040 Hb_050455_010 Hb_050455_010 Hb_000183_040--Hb_050455_010 Hb_000069_160 Hb_000069_160 Hb_000183_040--Hb_000069_160 Hb_003656_140 Hb_003656_140 Hb_000183_040--Hb_003656_140 Hb_137403_010 Hb_137403_010 Hb_000183_040--Hb_137403_010 Hb_150360_010 Hb_150360_010 Hb_000183_040--Hb_150360_010 Hb_002023_020 Hb_002023_020 Hb_000183_040--Hb_002023_020 Hb_050455_010--Hb_000069_160 Hb_002982_040 Hb_002982_040 Hb_050455_010--Hb_002982_040 Hb_003847_080 Hb_003847_080 Hb_050455_010--Hb_003847_080 Hb_185830_020 Hb_185830_020 Hb_050455_010--Hb_185830_020 Hb_012305_050 Hb_012305_050 Hb_050455_010--Hb_012305_050 Hb_000849_070 Hb_000849_070 Hb_050455_010--Hb_000849_070 Hb_002217_310 Hb_002217_310 Hb_000069_160--Hb_002217_310 Hb_000069_160--Hb_002982_040 Hb_000069_160--Hb_003847_080 Hb_000069_160--Hb_000849_070 Hb_003502_080 Hb_003502_080 Hb_000069_160--Hb_003502_080 Hb_003656_140--Hb_002023_020 Hb_003656_140--Hb_137403_010 Hb_041392_010 Hb_041392_010 Hb_003656_140--Hb_041392_010 Hb_187739_020 Hb_187739_020 Hb_003656_140--Hb_187739_020 Hb_003656_140--Hb_150360_010 Hb_000866_030 Hb_000866_030 Hb_003656_140--Hb_000866_030 Hb_137403_010--Hb_002023_020 Hb_137403_010--Hb_002982_040 Hb_000364_150 Hb_000364_150 Hb_137403_010--Hb_000364_150 Hb_005862_010 Hb_005862_010 Hb_137403_010--Hb_005862_010 Hb_137403_010--Hb_150360_010 Hb_150360_010--Hb_041392_010 Hb_004934_070 Hb_004934_070 Hb_150360_010--Hb_004934_070 Hb_002374_020 Hb_002374_020 Hb_150360_010--Hb_002374_020 Hb_039253_010 Hb_039253_010 Hb_002023_020--Hb_039253_010 Hb_002023_020--Hb_000364_150 Hb_000307_200 Hb_000307_200 Hb_002023_020--Hb_000307_200 Hb_071736_010 Hb_071736_010 Hb_002023_020--Hb_071736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.38864 3.03051 1.48664 5.04635 5.55461 13.5654
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.78536 4.1256 4.14342 5.8051 0.567161

CAGE analysis