Hb_121089_070

Information

Type -
Description -
Location Contig121089: 94170-96379
Sequence    

Annotation

kegg
ID rcu:RCOM_1692310
description zinc finger protein, putative
nr
ID XP_012087189.1
description PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
swissprot
ID Q9FNP2
description GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1
trembl
ID A0A067JR60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20439 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at5g08460-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121089_070 0.0 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
2 Hb_002097_060 0.1170587503 - - PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X1 [Jatropha curcas]
3 Hb_001006_180 0.1192565779 - - PREDICTED: endonuclease V-like [Jatropha curcas]
4 Hb_001687_040 0.1240143872 - - actin-depolymerizing factor [Hevea brasiliensis]
5 Hb_006573_220 0.1253671425 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
6 Hb_003053_030 0.1253854148 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
7 Hb_001135_080 0.1255406333 - - PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Jatropha curcas]
8 Hb_000069_100 0.1267317452 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007140_020 0.1286134119 - - hypothetical protein CICLE_v10008419mg [Citrus clementina]
10 Hb_002107_120 0.1303311708 - - PREDICTED: transcription elongation factor 1 homolog [Jatropha curcas]
11 Hb_001437_220 0.1305845802 - - Transmembrane protein, putative [Ricinus communis]
12 Hb_000496_060 0.1309952727 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH3 [Jatropha curcas]
13 Hb_002603_150 0.1311964093 - - PREDICTED: protein yippee-like [Jatropha curcas]
14 Hb_000181_300 0.13142796 - - PREDICTED: uncharacterized protein LOC105650445 isoform X2 [Jatropha curcas]
15 Hb_012779_100 0.1321257252 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004738_010 0.1332758517 - - PREDICTED: N-acetyl-D-glucosamine kinase-like [Jatropha curcas]
17 Hb_001191_090 0.134619718 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
18 Hb_002301_230 0.1349982065 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
19 Hb_001575_020 0.1358672374 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000329_330 0.1369473515 - - PREDICTED: vesicle-associated protein 1-2-like [Jatropha curcas]

Gene co-expression network

sample Hb_121089_070 Hb_121089_070 Hb_002097_060 Hb_002097_060 Hb_121089_070--Hb_002097_060 Hb_001006_180 Hb_001006_180 Hb_121089_070--Hb_001006_180 Hb_001687_040 Hb_001687_040 Hb_121089_070--Hb_001687_040 Hb_006573_220 Hb_006573_220 Hb_121089_070--Hb_006573_220 Hb_003053_030 Hb_003053_030 Hb_121089_070--Hb_003053_030 Hb_001135_080 Hb_001135_080 Hb_121089_070--Hb_001135_080 Hb_003376_030 Hb_003376_030 Hb_002097_060--Hb_003376_030 Hb_000069_100 Hb_000069_100 Hb_002097_060--Hb_000069_100 Hb_003455_040 Hb_003455_040 Hb_002097_060--Hb_003455_040 Hb_002097_060--Hb_006573_220 Hb_001575_020 Hb_001575_020 Hb_002097_060--Hb_001575_020 Hb_148200_010 Hb_148200_010 Hb_002097_060--Hb_148200_010 Hb_001762_060 Hb_001762_060 Hb_001006_180--Hb_001762_060 Hb_024714_060 Hb_024714_060 Hb_001006_180--Hb_024714_060 Hb_012423_050 Hb_012423_050 Hb_001006_180--Hb_012423_050 Hb_006831_030 Hb_006831_030 Hb_001006_180--Hb_006831_030 Hb_000398_160 Hb_000398_160 Hb_001006_180--Hb_000398_160 Hb_162275_030 Hb_162275_030 Hb_001006_180--Hb_162275_030 Hb_001687_040--Hb_006573_220 Hb_001687_040--Hb_002097_060 Hb_001191_090 Hb_001191_090 Hb_001687_040--Hb_001191_090 Hb_001687_040--Hb_000069_100 Hb_000272_070 Hb_000272_070 Hb_001687_040--Hb_000272_070 Hb_001687_040--Hb_003053_030 Hb_006573_220--Hb_001191_090 Hb_000329_330 Hb_000329_330 Hb_006573_220--Hb_000329_330 Hb_006573_220--Hb_003376_030 Hb_007382_150 Hb_007382_150 Hb_006573_220--Hb_007382_150 Hb_003053_030--Hb_001191_090 Hb_000181_300 Hb_000181_300 Hb_003053_030--Hb_000181_300 Hb_003053_030--Hb_148200_010 Hb_000364_030 Hb_000364_030 Hb_003053_030--Hb_000364_030 Hb_004156_040 Hb_004156_040 Hb_003053_030--Hb_004156_040 Hb_003994_040 Hb_003994_040 Hb_003053_030--Hb_003994_040 Hb_001105_070 Hb_001105_070 Hb_001135_080--Hb_001105_070 Hb_000496_060 Hb_000496_060 Hb_001135_080--Hb_000496_060 Hb_007926_060 Hb_007926_060 Hb_001135_080--Hb_007926_060 Hb_001882_070 Hb_001882_070 Hb_001135_080--Hb_001882_070 Hb_005433_040 Hb_005433_040 Hb_001135_080--Hb_005433_040 Hb_002234_070 Hb_002234_070 Hb_001135_080--Hb_002234_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.846949 0.118198 0.18205 0.371712 0.107839 0.550951
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.69549 1.50406 1.16696 0.487989 0.295182

CAGE analysis