Hb_101133_020

Information

Type -
Description -
Location Contig101133: 17676-18795
Sequence    

Annotation

kegg
ID tcc:TCM_017468
description HSP20-like chaperones superfamily protein
nr
ID XP_012086420.1
description PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Jatropha curcas]
swissprot
ID Q9FHQ3
description 15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=2 SV=1
trembl
ID A0A067K1X2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22511 PE=3 SV=1
Gene Ontology
ID GO:0005782
description kda heat shock peroxisomal

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00605: 17671-18712
cDNA
(Sanger)
(ID:Location)		 001_O16.ab1: 17717-18680 , 003_O22.ab1: 17807-18680 , 015_D17.ab1: 18090-18680 , 021_G17.ab1: 17717-18680 , 032_H11.ab1: 17961-18675 , 049_B14.ab1: 17701-17922 , 051_F15.ab1: 17708-18680

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101133_020 0.0 - - PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Jatropha curcas]
2 Hb_000365_080 0.1529111335 - - PREDICTED: uncharacterized protein LOC105649037 [Jatropha curcas]
3 Hb_005211_190 0.1574844577 - - PREDICTED: uncharacterized protein LOC105641994 [Jatropha curcas]
4 Hb_001424_020 0.1680639286 - - PREDICTED: AP-1 complex subunit sigma-2 isoform X2 [Solanum lycopersicum]
5 Hb_000320_180 0.1681596983 - - PREDICTED: uncharacterized protein LOC105649315 [Jatropha curcas]
6 Hb_148909_020 0.1697137848 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Jatropha curcas]
7 Hb_000159_070 0.174325815 - - JHL03K20.4 [Jatropha curcas]
8 Hb_000483_250 0.17607567 - - PREDICTED: uncharacterized protein LOC105803540 [Gossypium raimondii]
9 Hb_000069_140 0.1801179394 - - PREDICTED: uncharacterized protein LOC105642831 [Jatropha curcas]
10 Hb_001304_140 0.180780809 - - PREDICTED: transmembrane protein 256 homolog [Jatropha curcas]
11 Hb_009421_040 0.1822965665 - - PREDICTED: eukaryotic initiation factor 4A [Jatropha curcas]
12 Hb_001158_230 0.1830324125 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Jatropha curcas]
13 Hb_184403_020 0.1835236921 - - PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]
14 Hb_010582_010 0.1843873637 - - hypothetical protein POPTR_0011s15670g [Populus trichocarpa]
15 Hb_002687_170 0.186020232 - - PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Jatropha curcas]
16 Hb_060618_010 0.1883057373 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
17 Hb_000260_200 0.1884121368 - - -
18 Hb_002609_210 0.1886445594 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
19 Hb_000979_200 0.1890071404 - - PREDICTED: uncharacterized protein LOC105634088 [Jatropha curcas]
20 Hb_007944_040 0.1898036226 - - 60S ribosomal protein L18aB [Hevea brasiliensis]

Gene co-expression network

sample Hb_101133_020 Hb_101133_020 Hb_000365_080 Hb_000365_080 Hb_101133_020--Hb_000365_080 Hb_005211_190 Hb_005211_190 Hb_101133_020--Hb_005211_190 Hb_001424_020 Hb_001424_020 Hb_101133_020--Hb_001424_020 Hb_000320_180 Hb_000320_180 Hb_101133_020--Hb_000320_180 Hb_148909_020 Hb_148909_020 Hb_101133_020--Hb_148909_020 Hb_000159_070 Hb_000159_070 Hb_101133_020--Hb_000159_070 Hb_000365_080--Hb_005211_190 Hb_007304_070 Hb_007304_070 Hb_000365_080--Hb_007304_070 Hb_007416_020 Hb_007416_020 Hb_000365_080--Hb_007416_020 Hb_007575_070 Hb_007575_070 Hb_000365_080--Hb_007575_070 Hb_000365_080--Hb_001424_020 Hb_002107_120 Hb_002107_120 Hb_000365_080--Hb_002107_120 Hb_002609_210 Hb_002609_210 Hb_005211_190--Hb_002609_210 Hb_005211_190--Hb_001424_020 Hb_005211_190--Hb_002107_120 Hb_009421_040 Hb_009421_040 Hb_005211_190--Hb_009421_040 Hb_000680_140 Hb_000680_140 Hb_005211_190--Hb_000680_140 Hb_000260_200 Hb_000260_200 Hb_001424_020--Hb_000260_200 Hb_002687_170 Hb_002687_170 Hb_001424_020--Hb_002687_170 Hb_000069_140 Hb_000069_140 Hb_001424_020--Hb_000069_140 Hb_000083_090 Hb_000083_090 Hb_001424_020--Hb_000083_090 Hb_138585_050 Hb_138585_050 Hb_000320_180--Hb_138585_050 Hb_004459_040 Hb_004459_040 Hb_000320_180--Hb_004459_040 Hb_024714_050 Hb_024714_050 Hb_000320_180--Hb_024714_050 Hb_000042_200 Hb_000042_200 Hb_000320_180--Hb_000042_200 Hb_000320_180--Hb_002687_170 Hb_004846_090 Hb_004846_090 Hb_000320_180--Hb_004846_090 Hb_000483_250 Hb_000483_250 Hb_148909_020--Hb_000483_250 Hb_148909_020--Hb_000159_070 Hb_007290_080 Hb_007290_080 Hb_148909_020--Hb_007290_080 Hb_008887_040 Hb_008887_040 Hb_148909_020--Hb_008887_040 Hb_060618_010 Hb_060618_010 Hb_148909_020--Hb_060618_010 Hb_000172_420 Hb_000172_420 Hb_148909_020--Hb_000172_420 Hb_009384_020 Hb_009384_020 Hb_000159_070--Hb_009384_020 Hb_076693_040 Hb_076693_040 Hb_000159_070--Hb_076693_040 Hb_003988_040 Hb_003988_040 Hb_000159_070--Hb_003988_040 Hb_019516_100 Hb_019516_100 Hb_000159_070--Hb_019516_100 Hb_000159_070--Hb_000172_420 Hb_002897_080 Hb_002897_080 Hb_000159_070--Hb_002897_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
228.089 67.2649 76.011 67.9781 298.845 165.526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
933.579 1127.33 224.526 88.5191 413.253

CAGE analysis