Hb_097933_010

Information

Type -
Description -
Location Contig97933: 5264-7446
Sequence    

Annotation

kegg
ID rcu:RCOM_0605930
description alcohol dehydrogenase, putative (EC:1.3.1.74)
nr
ID XP_012075369.1
description PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SLN8
description 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum GN=DBR PE=1 SV=1
trembl
ID A0A067KJD5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10657 PE=4 SV=1
Gene Ontology
ID GO:0008270
description 2-alkenal reductase (nadp(+)-dependent)-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097933_010 0.0 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
2 Hb_188163_010 0.1027684486 - - hypothetical protein CISIN_1g048732mg [Citrus sinensis]
3 Hb_000575_050 0.1056460506 - - hypothetical protein CISIN_1g0468601mg, partial [Citrus sinensis]
4 Hb_021888_160 0.1056474645 - - -
5 Hb_006907_110 0.1056592098 - - -
6 Hb_000501_080 0.1060174207 - - hypothetical protein OsJ_22457 [Oryza sativa Japonica Group]
7 Hb_174662_020 0.1060456856 - - PREDICTED: uncharacterized protein LOC104888075 [Beta vulgaris subsp. vulgaris]
8 Hb_000574_490 0.1060926651 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Jatropha curcas]
9 Hb_007810_080 0.1065939085 - - PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo]
10 Hb_003780_010 0.1067633196 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000190_130 0.1103520967 - - cysteine protease inhibitor [Populus tremula]
12 Hb_093039_010 0.1114597768 - - JHL22C18.10 [Jatropha curcas]
13 Hb_002110_220 0.1121853923 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007622_010 0.1135064815 - - contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana]
15 Hb_042083_020 0.1138268355 - - -
16 Hb_002387_030 0.1179073903 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002570_050 0.1185491478 - - PREDICTED: uncharacterized protein LOC104897677 [Beta vulgaris subsp. vulgaris]
18 Hb_003940_060 0.1263566872 - - PREDICTED: uncharacterized protein LOC105784680 [Gossypium raimondii]
19 Hb_029695_040 0.1279951689 - - Pectate lyase precursor, putative [Ricinus communis]
20 Hb_001234_090 0.128514687 - - hypothetical protein CISIN_1g013527mg [Citrus sinensis]

Gene co-expression network

sample Hb_097933_010 Hb_097933_010 Hb_188163_010 Hb_188163_010 Hb_097933_010--Hb_188163_010 Hb_000575_050 Hb_000575_050 Hb_097933_010--Hb_000575_050 Hb_021888_160 Hb_021888_160 Hb_097933_010--Hb_021888_160 Hb_006907_110 Hb_006907_110 Hb_097933_010--Hb_006907_110 Hb_000501_080 Hb_000501_080 Hb_097933_010--Hb_000501_080 Hb_174662_020 Hb_174662_020 Hb_097933_010--Hb_174662_020 Hb_004129_180 Hb_004129_180 Hb_188163_010--Hb_004129_180 Hb_010129_020 Hb_010129_020 Hb_188163_010--Hb_010129_020 Hb_000906_120 Hb_000906_120 Hb_188163_010--Hb_000906_120 Hb_002188_050 Hb_002188_050 Hb_188163_010--Hb_002188_050 Hb_006415_010 Hb_006415_010 Hb_188163_010--Hb_006415_010 Hb_000575_050--Hb_006907_110 Hb_000575_050--Hb_021888_160 Hb_000574_490 Hb_000574_490 Hb_000575_050--Hb_000574_490 Hb_000575_050--Hb_000501_080 Hb_000575_050--Hb_174662_020 Hb_003780_010 Hb_003780_010 Hb_000575_050--Hb_003780_010 Hb_021888_160--Hb_006907_110 Hb_021888_160--Hb_000501_080 Hb_021888_160--Hb_174662_020 Hb_021888_160--Hb_000574_490 Hb_007810_080 Hb_007810_080 Hb_021888_160--Hb_007810_080 Hb_006907_110--Hb_000574_490 Hb_006907_110--Hb_000501_080 Hb_006907_110--Hb_174662_020 Hb_006907_110--Hb_003780_010 Hb_000501_080--Hb_174662_020 Hb_000501_080--Hb_007810_080 Hb_000501_080--Hb_000574_490 Hb_174662_020--Hb_007810_080 Hb_174662_020--Hb_000574_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0193719 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.407989 0.447575

CAGE analysis