Hb_032006_010

Information

Type -
Description -
Location Contig32006: 35225-45529
Sequence    

Annotation

kegg
ID sly:104646181
description uncharacterized LOC104646181
nr
ID XP_012072612.1
description PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061DPQ5
description Uncharacterized protein OS=Theobroma cacao GN=TCM_003164 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032006_010 0.0 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
2 Hb_072912_010 0.2177605916 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
3 Hb_004884_060 0.2196471919 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
4 Hb_004545_150 0.2213224541 - - PREDICTED: paramyosin [Jatropha curcas]
5 Hb_001102_110 0.2249749815 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Jatropha curcas]
6 Hb_005470_010 0.2274044235 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
7 Hb_003906_110 0.2346882136 - - PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
8 Hb_003906_120 0.2371173725 - - -
9 Hb_002960_120 0.2419839374 - - PREDICTED: uncharacterized protein LOC105635318 [Jatropha curcas]
10 Hb_002989_080 0.2423256058 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
11 Hb_010931_100 0.2423758477 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
12 Hb_095397_010 0.2427977861 - - hypothetical protein 25 [Hevea brasiliensis]
13 Hb_000249_110 0.2511581647 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
14 Hb_000784_130 0.2514909972 - - hypothetical protein JCGZ_22813 [Jatropha curcas]
15 Hb_005488_100 0.2532038544 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
16 Hb_023610_010 0.2533597996 - - conserved hypothetical protein [Ricinus communis]
17 Hb_027751_020 0.2540933741 - - PREDICTED: uncharacterized protein LOC104886652 [Beta vulgaris subsp. vulgaris]
18 Hb_002609_260 0.2562796803 - - CCCH-type zinc finger protein [Hevea brasiliensis]
19 Hb_094437_070 0.2573022299 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
20 Hb_004650_020 0.2578109749 - - -

Gene co-expression network

sample Hb_032006_010 Hb_032006_010 Hb_072912_010 Hb_072912_010 Hb_032006_010--Hb_072912_010 Hb_004884_060 Hb_004884_060 Hb_032006_010--Hb_004884_060 Hb_004545_150 Hb_004545_150 Hb_032006_010--Hb_004545_150 Hb_001102_110 Hb_001102_110 Hb_032006_010--Hb_001102_110 Hb_005470_010 Hb_005470_010 Hb_032006_010--Hb_005470_010 Hb_003906_110 Hb_003906_110 Hb_032006_010--Hb_003906_110 Hb_002301_020 Hb_002301_020 Hb_072912_010--Hb_002301_020 Hb_001425_120 Hb_001425_120 Hb_072912_010--Hb_001425_120 Hb_000907_100 Hb_000907_100 Hb_072912_010--Hb_000907_100 Hb_000155_070 Hb_000155_070 Hb_072912_010--Hb_000155_070 Hb_000720_180 Hb_000720_180 Hb_072912_010--Hb_000720_180 Hb_000155_080 Hb_000155_080 Hb_072912_010--Hb_000155_080 Hb_004884_060--Hb_003906_110 Hb_000249_110 Hb_000249_110 Hb_004884_060--Hb_000249_110 Hb_004884_060--Hb_000907_100 Hb_002989_080 Hb_002989_080 Hb_004884_060--Hb_002989_080 Hb_007178_010 Hb_007178_010 Hb_004884_060--Hb_007178_010 Hb_002843_160 Hb_002843_160 Hb_004884_060--Hb_002843_160 Hb_010931_100 Hb_010931_100 Hb_004545_150--Hb_010931_100 Hb_002609_260 Hb_002609_260 Hb_004545_150--Hb_002609_260 Hb_004545_150--Hb_002989_080 Hb_000264_190 Hb_000264_190 Hb_004545_150--Hb_000264_190 Hb_005488_100 Hb_005488_100 Hb_004545_150--Hb_005488_100 Hb_000563_540 Hb_000563_540 Hb_004545_150--Hb_000563_540 Hb_176022_020 Hb_176022_020 Hb_001102_110--Hb_176022_020 Hb_004156_060 Hb_004156_060 Hb_001102_110--Hb_004156_060 Hb_012055_020 Hb_012055_020 Hb_001102_110--Hb_012055_020 Hb_001102_110--Hb_004884_060 Hb_003656_030 Hb_003656_030 Hb_001102_110--Hb_003656_030 Hb_040996_010 Hb_040996_010 Hb_001102_110--Hb_040996_010 Hb_000895_040 Hb_000895_040 Hb_005470_010--Hb_000895_040 Hb_040506_010 Hb_040506_010 Hb_005470_010--Hb_040506_010 Hb_000033_060 Hb_000033_060 Hb_005470_010--Hb_000033_060 Hb_005470_010--Hb_072912_010 Hb_002960_120 Hb_002960_120 Hb_005470_010--Hb_002960_120 Hb_009193_130 Hb_009193_130 Hb_005470_010--Hb_009193_130 Hb_003906_120 Hb_003906_120 Hb_003906_110--Hb_003906_120 Hb_003906_110--Hb_010931_100 Hb_003906_110--Hb_007178_010 Hb_003906_110--Hb_002989_080 Hb_003906_110--Hb_000249_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0416976 0 0 0 0.0313194 0.0283293
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0236988 0 0.0353168 0.00742163 0

CAGE analysis