Hb_027506_060

Information

Type transcription factor
Description TF Family: Tify
Location Contig27506: 90180-90715
Sequence    

Annotation

kegg
ID rcu:RCOM_0631830
description hypothetical protein
nr
ID AIY25008.1
description JAZ7 [Hevea brasiliensis]
swissprot
ID Q8LBM2
description Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1
trembl
ID A0A0B4RUQ7
description JAZ7 OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027506_060 0.0 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
2 Hb_034642_010 0.0801943718 - - PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
3 Hb_125201_010 0.0850778812 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
4 Hb_047955_010 0.089747443 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
5 Hb_000032_150 0.0912536975 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
6 Hb_001257_040 0.0932175322 - - PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
7 Hb_000086_600 0.1008773992 - - -
8 Hb_157957_010 0.1009963583 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
9 Hb_005618_020 0.1015988009 - - hypothetical protein RCOM_1342750 [Ricinus communis]
10 Hb_004586_120 0.1039722153 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
11 Hb_002252_030 0.1045151694 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
12 Hb_009707_010 0.1051864048 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
13 Hb_006648_030 0.1079807933 - - Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus communis]
14 Hb_078171_010 0.1081632841 - - PREDICTED: uncharacterized RING finger protein P8B7.15c-like [Jatropha curcas]
15 Hb_106810_010 0.1173501736 - - receptor serine/threonine kinase, putative [Ricinus communis]
16 Hb_034581_010 0.1204210452 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
17 Hb_000338_020 0.1246526631 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
18 Hb_000359_230 0.1252094544 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
19 Hb_004032_220 0.1253280007 - - Calmodulin, putative [Ricinus communis]
20 Hb_002548_030 0.1266714483 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]

Gene co-expression network

sample Hb_027506_060 Hb_027506_060 Hb_034642_010 Hb_034642_010 Hb_027506_060--Hb_034642_010 Hb_125201_010 Hb_125201_010 Hb_027506_060--Hb_125201_010 Hb_047955_010 Hb_047955_010 Hb_027506_060--Hb_047955_010 Hb_000032_150 Hb_000032_150 Hb_027506_060--Hb_000032_150 Hb_001257_040 Hb_001257_040 Hb_027506_060--Hb_001257_040 Hb_000086_600 Hb_000086_600 Hb_027506_060--Hb_000086_600 Hb_034642_010--Hb_000032_150 Hb_034642_010--Hb_001257_040 Hb_078171_010 Hb_078171_010 Hb_034642_010--Hb_078171_010 Hb_034642_010--Hb_047955_010 Hb_004586_120 Hb_004586_120 Hb_034642_010--Hb_004586_120 Hb_009707_010 Hb_009707_010 Hb_125201_010--Hb_009707_010 Hb_125201_010--Hb_004586_120 Hb_000338_020 Hb_000338_020 Hb_125201_010--Hb_000338_020 Hb_005618_020 Hb_005618_020 Hb_125201_010--Hb_005618_020 Hb_157957_010 Hb_157957_010 Hb_125201_010--Hb_157957_010 Hb_114932_010 Hb_114932_010 Hb_125201_010--Hb_114932_010 Hb_047955_010--Hb_000032_150 Hb_003207_230 Hb_003207_230 Hb_047955_010--Hb_003207_230 Hb_000359_230 Hb_000359_230 Hb_047955_010--Hb_000359_230 Hb_124953_010 Hb_124953_010 Hb_047955_010--Hb_124953_010 Hb_002252_030 Hb_002252_030 Hb_047955_010--Hb_002252_030 Hb_047955_010--Hb_157957_010 Hb_000032_150--Hb_124953_010 Hb_000032_150--Hb_001257_040 Hb_000032_150--Hb_003207_230 Hb_007858_020 Hb_007858_020 Hb_000032_150--Hb_007858_020 Hb_004032_220 Hb_004032_220 Hb_000032_150--Hb_004032_220 Hb_001257_040--Hb_004586_120 Hb_000422_050 Hb_000422_050 Hb_001257_040--Hb_000422_050 Hb_000322_020 Hb_000322_020 Hb_001257_040--Hb_000322_020 Hb_001257_040--Hb_124953_010 Hb_001257_040--Hb_004032_220 Hb_117602_010 Hb_117602_010 Hb_000086_600--Hb_117602_010 Hb_000086_600--Hb_005618_020 Hb_000086_600--Hb_009707_010 Hb_000086_600--Hb_114932_010 Hb_005843_080 Hb_005843_080 Hb_000086_600--Hb_005843_080 Hb_147137_020 Hb_147137_020 Hb_000086_600--Hb_147137_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 59.8367 18.2402 10.019 0.140946 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.645533 0.212828 0.217567 0.234315

CAGE analysis