Hb_026988_030

Information

Type -
Description -
Location Contig26988: 14817-18239
Sequence    

Annotation

kegg
ID rcu:RCOM_0522370
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_012071024.1
description PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
swissprot
ID A6YIH8
description Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1
trembl
ID B9S9U3
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0522370 PE=3 SV=1
Gene Ontology
ID GO:0005506
description premnaspirodiene oxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026988_030 0.0 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
2 Hb_112255_010 0.1735593018 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
3 Hb_072695_010 0.1879691578 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
4 Hb_151061_040 0.1911632394 - - putative retrotransposon protein [Phyllostachys edulis]
5 Hb_000474_020 0.1917467029 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
6 Hb_003683_100 0.1929695659 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_007924_040 0.1936148199 - - PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Populus euphratica]
8 Hb_000031_070 0.1947510122 - - Thioredoxin domain-containing protein, putative [Ricinus communis]
9 Hb_001338_010 0.1957421526 transcription factor TF Family: GNAT GCN5-related N-acetyltransferase family protein [Populus trichocarpa]
10 Hb_125153_010 0.196791035 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Malus domestica]
11 Hb_001072_060 0.1974981015 - - PREDICTED: uncharacterized protein LOC105645525 [Jatropha curcas]
12 Hb_103255_010 0.1983935424 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
13 Hb_001779_050 0.1988357477 - - polyprotein [Ananas comosus]
14 Hb_176140_010 0.1990904995 - - polyprotein [Oryza australiensis]
15 Hb_005087_020 0.1992159179 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
16 Hb_001790_110 0.1995969042 - - unknown [Populus trichocarpa]
17 Hb_000388_020 0.2002352002 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
18 Hb_003477_020 0.2010217531 desease resistance Gene Name: AAA_29 PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
19 Hb_007044_030 0.2015481516 - - Os06g0273400 [Oryza sativa Japonica Group]
20 Hb_054839_010 0.2018416999 - - PsbC, partial (chloroplast) [Asimina parviflora]

Gene co-expression network

sample Hb_026988_030 Hb_026988_030 Hb_112255_010 Hb_112255_010 Hb_026988_030--Hb_112255_010 Hb_072695_010 Hb_072695_010 Hb_026988_030--Hb_072695_010 Hb_151061_040 Hb_151061_040 Hb_026988_030--Hb_151061_040 Hb_000474_020 Hb_000474_020 Hb_026988_030--Hb_000474_020 Hb_003683_100 Hb_003683_100 Hb_026988_030--Hb_003683_100 Hb_007924_040 Hb_007924_040 Hb_026988_030--Hb_007924_040 Hb_006494_010 Hb_006494_010 Hb_112255_010--Hb_006494_010 Hb_004109_360 Hb_004109_360 Hb_112255_010--Hb_004109_360 Hb_000340_120 Hb_000340_120 Hb_112255_010--Hb_000340_120 Hb_112255_010--Hb_007924_040 Hb_112255_010--Hb_003683_100 Hb_125153_010 Hb_125153_010 Hb_072695_010--Hb_125153_010 Hb_001790_110 Hb_001790_110 Hb_072695_010--Hb_001790_110 Hb_000959_380 Hb_000959_380 Hb_072695_010--Hb_000959_380 Hb_072695_010--Hb_151061_040 Hb_000388_020 Hb_000388_020 Hb_072695_010--Hb_000388_020 Hb_054839_010 Hb_054839_010 Hb_072695_010--Hb_054839_010 Hb_151061_040--Hb_125153_010 Hb_000031_070 Hb_000031_070 Hb_151061_040--Hb_000031_070 Hb_001338_010 Hb_001338_010 Hb_151061_040--Hb_001338_010 Hb_005087_020 Hb_005087_020 Hb_151061_040--Hb_005087_020 Hb_151061_040--Hb_054839_010 Hb_001779_050 Hb_001779_050 Hb_151061_040--Hb_001779_050 Hb_000474_020--Hb_003683_100 Hb_000474_020--Hb_007924_040 Hb_001072_060 Hb_001072_060 Hb_000474_020--Hb_001072_060 Hb_035484_010 Hb_035484_010 Hb_000474_020--Hb_035484_010 Hb_029154_020 Hb_029154_020 Hb_000474_020--Hb_029154_020 Hb_029793_020 Hb_029793_020 Hb_000474_020--Hb_029793_020 Hb_003683_100--Hb_007924_040 Hb_003683_100--Hb_001072_060 Hb_003683_100--Hb_035484_010 Hb_003683_100--Hb_029154_020 Hb_003683_100--Hb_029793_020 Hb_007924_040--Hb_001072_060 Hb_007924_040--Hb_035484_010 Hb_007924_040--Hb_029154_020 Hb_007924_040--Hb_029793_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.00764801 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.017787 0 0 0.225533

CAGE analysis