Hb_025107_010

Information

Type -
Description -
Location Contig25107: 29227-30685
Sequence    

Annotation

kegg
ID cic:CICLE_v10023282mg
description hypothetical protein
nr
ID XP_011094039.1
description PREDICTED: alkaline/neutral invertase CINV2-like [Sesamum indicum]
swissprot
ID Q69T31
description Cytosolic invertase 1 OS=Oryza sativa subsp. japonica GN=CINV1 PE=1 SV=1
trembl
ID A0A067HF66
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035779mg PE=4 SV=1
Gene Ontology
ID GO:0033926
description alkaline neutral invertase cinv2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025107_010 0.0 - - PREDICTED: alkaline/neutral invertase CINV2-like [Sesamum indicum]
2 Hb_005043_040 0.0075407062 - - hypothetical protein POPTR_0004s17180g [Populus trichocarpa]
3 Hb_000024_100 0.0076756244 - - PREDICTED: uncharacterized protein LOC105631348 [Jatropha curcas]
4 Hb_092655_010 0.0483343348 - - PREDICTED: uncharacterized protein LOC105650151 [Jatropha curcas]
5 Hb_151052_010 0.0561493846 - - -
6 Hb_005653_010 0.0562387374 - - CEN-like protein 2 [Jatropha curcas]
7 Hb_000594_010 0.0843257906 - - PREDICTED: lysine histidine transporter-like 6 isoform X3 [Populus euphratica]
8 Hb_000500_250 0.0925838375 - - hypothetical protein CISIN_1g006096mg [Citrus sinensis]
9 Hb_019953_010 0.0942402534 - - hypothetical protein CICLE_v10019877mg [Citrus clementina]
10 Hb_020178_030 0.0945247278 - - conserved hypothetical protein [Ricinus communis]
11 Hb_025311_010 0.0966943365 - - -
12 Hb_005375_080 0.0992334679 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like [Jatropha curcas]
13 Hb_002636_170 0.1026846832 - - DNA-3-methyladenine glycosylase, putative [Ricinus communis]
14 Hb_000696_130 0.1036275905 - - nucleic acid binding protein, putative [Ricinus communis]
15 Hb_000101_230 0.1065524217 - - hypothetical protein CICLE_v10030840mg [Citrus clementina]
16 Hb_000155_130 0.1074000231 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000286_120 0.1074232771 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
18 Hb_006634_120 0.1121471596 - - PREDICTED: protein trichome birefringence-like 3 [Jatropha curcas]
19 Hb_000480_020 0.1144256212 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002660_180 0.114508041 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_025107_010 Hb_025107_010 Hb_005043_040 Hb_005043_040 Hb_025107_010--Hb_005043_040 Hb_000024_100 Hb_000024_100 Hb_025107_010--Hb_000024_100 Hb_092655_010 Hb_092655_010 Hb_025107_010--Hb_092655_010 Hb_151052_010 Hb_151052_010 Hb_025107_010--Hb_151052_010 Hb_005653_010 Hb_005653_010 Hb_025107_010--Hb_005653_010 Hb_000594_010 Hb_000594_010 Hb_025107_010--Hb_000594_010 Hb_005043_040--Hb_000024_100 Hb_005043_040--Hb_151052_010 Hb_005043_040--Hb_005653_010 Hb_005043_040--Hb_092655_010 Hb_000500_250 Hb_000500_250 Hb_005043_040--Hb_000500_250 Hb_000024_100--Hb_151052_010 Hb_000024_100--Hb_005653_010 Hb_000024_100--Hb_092655_010 Hb_000024_100--Hb_000500_250 Hb_000155_130 Hb_000155_130 Hb_092655_010--Hb_000155_130 Hb_000480_020 Hb_000480_020 Hb_092655_010--Hb_000480_020 Hb_092655_010--Hb_000594_010 Hb_151052_010--Hb_005653_010 Hb_151052_010--Hb_000500_250 Hb_020178_030 Hb_020178_030 Hb_151052_010--Hb_020178_030 Hb_025311_010 Hb_025311_010 Hb_151052_010--Hb_025311_010 Hb_005375_080 Hb_005375_080 Hb_151052_010--Hb_005375_080 Hb_005653_010--Hb_000500_250 Hb_005653_010--Hb_020178_030 Hb_005653_010--Hb_025311_010 Hb_005653_010--Hb_005375_080 Hb_009164_010 Hb_009164_010 Hb_000594_010--Hb_009164_010 Hb_019953_010 Hb_019953_010 Hb_000594_010--Hb_019953_010 Hb_002636_170 Hb_002636_170 Hb_000594_010--Hb_002636_170 Hb_000696_130 Hb_000696_130 Hb_000594_010--Hb_000696_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.08403 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.801548

CAGE analysis