Hb_012258_010

Information

Type -
Description -
Location Contig12258: 11101-16828
Sequence    

Annotation

kegg
ID rcu:RCOM_1675080
description adenylyl cyclase-associated protein, putative
nr
ID XP_012069926.1
description PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
swissprot
ID O65902
description Cyclase-associated protein 1 OS=Arabidopsis thaliana GN=CAP1 PE=2 SV=1
trembl
ID A0A067LD01
description Adenylyl cyclase-associated protein OS=Jatropha curcas GN=JCGZ_10087 PE=3 SV=1
Gene Ontology
ID GO:0005829
description adenylyl cyclase-associated protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06848: 11279-11600 , PASA_asmbl_06849: 14229-16826
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012258_010 0.0 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
2 Hb_000375_350 0.0681810159 - - PREDICTED: uncharacterized protein LOC105641632 [Jatropha curcas]
3 Hb_002304_150 0.0758516994 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
4 Hb_001799_030 0.0826129347 - - PREDICTED: ELMO domain-containing protein C-like [Jatropha curcas]
5 Hb_001300_150 0.0863797097 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
6 Hb_000345_310 0.087188292 - - PREDICTED: sucrose nonfermenting 4-like protein isoform X3 [Jatropha curcas]
7 Hb_171376_010 0.0879623872 - - PREDICTED: uncharacterized protein LOC105630877 isoform X1 [Jatropha curcas]
8 Hb_013575_010 0.0900337213 - - Hepatocyte growth factor-regulated tyrosine kinase substrate, putative [Ricinus communis]
9 Hb_000300_500 0.0901844783 - - PREDICTED: uncharacterized protein LOC105632604 [Jatropha curcas]
10 Hb_000637_110 0.092121527 - - hypothetical protein B456_013G081300 [Gossypium raimondii]
11 Hb_004162_130 0.0931871683 - - conserved hypothetical protein [Ricinus communis]
12 Hb_017895_040 0.0940072795 - - hypothetical protein POPTR_0006s08120g [Populus trichocarpa]
13 Hb_084247_010 0.0959913342 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001711_020 0.0962217759 - - PREDICTED: AP-2 complex subunit mu [Jatropha curcas]
15 Hb_003728_060 0.0969998414 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
16 Hb_010931_130 0.0979111965 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
17 Hb_002641_060 0.0982795431 - - prefoldin subunit, putative [Ricinus communis]
18 Hb_000599_250 0.0983046875 - - hypothetical protein POPTR_0002s03730g [Populus trichocarpa]
19 Hb_004223_050 0.0985477393 - - hexokinase [Manihot esculenta]
20 Hb_000058_130 0.0985727117 - - PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]

Gene co-expression network

sample Hb_012258_010 Hb_012258_010 Hb_000375_350 Hb_000375_350 Hb_012258_010--Hb_000375_350 Hb_002304_150 Hb_002304_150 Hb_012258_010--Hb_002304_150 Hb_001799_030 Hb_001799_030 Hb_012258_010--Hb_001799_030 Hb_001300_150 Hb_001300_150 Hb_012258_010--Hb_001300_150 Hb_000345_310 Hb_000345_310 Hb_012258_010--Hb_000345_310 Hb_171376_010 Hb_171376_010 Hb_012258_010--Hb_171376_010 Hb_017895_040 Hb_017895_040 Hb_000375_350--Hb_017895_040 Hb_000375_350--Hb_001300_150 Hb_000599_250 Hb_000599_250 Hb_000375_350--Hb_000599_250 Hb_005496_140 Hb_005496_140 Hb_000375_350--Hb_005496_140 Hb_002641_060 Hb_002641_060 Hb_000375_350--Hb_002641_060 Hb_013575_010 Hb_013575_010 Hb_000375_350--Hb_013575_010 Hb_002304_150--Hb_001799_030 Hb_006132_090 Hb_006132_090 Hb_002304_150--Hb_006132_090 Hb_002304_150--Hb_000375_350 Hb_000110_310 Hb_000110_310 Hb_002304_150--Hb_000110_310 Hb_003728_060 Hb_003728_060 Hb_002304_150--Hb_003728_060 Hb_000720_040 Hb_000720_040 Hb_001799_030--Hb_000720_040 Hb_000300_500 Hb_000300_500 Hb_001799_030--Hb_000300_500 Hb_001799_030--Hb_000110_310 Hb_002681_100 Hb_002681_100 Hb_001799_030--Hb_002681_100 Hb_000465_160 Hb_000465_160 Hb_001300_150--Hb_000465_160 Hb_001300_150--Hb_000599_250 Hb_003582_060 Hb_003582_060 Hb_001300_150--Hb_003582_060 Hb_027380_130 Hb_027380_130 Hb_001300_150--Hb_027380_130 Hb_000260_030 Hb_000260_030 Hb_001300_150--Hb_000260_030 Hb_000345_310--Hb_000375_350 Hb_000345_310--Hb_013575_010 Hb_000260_350 Hb_000260_350 Hb_000345_310--Hb_000260_350 Hb_000345_310--Hb_000599_250 Hb_000925_130 Hb_000925_130 Hb_000345_310--Hb_000925_130 Hb_000345_310--Hb_001300_150 Hb_171376_010--Hb_000375_350 Hb_171376_010--Hb_002304_150 Hb_000690_160 Hb_000690_160 Hb_171376_010--Hb_000690_160 Hb_000869_020 Hb_000869_020 Hb_171376_010--Hb_000869_020 Hb_171376_010--Hb_003728_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.88575 7.64228 16.4012 17.9474 9.30823 10.4575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.2218 11.5088 14.676 6.3325 8.78085

CAGE analysis