Hb_027380_130

Information

Type -
Description -
Location Contig27380: 112587-119249
Sequence    

Annotation

kegg
ID rcu:RCOM_0485090
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012072157.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Jatropha curcas]
swissprot
ID Q93VD3
description CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1
trembl
ID A0A067KSM5
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_04651 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cbl-interacting serine threonine-protein kinase 23 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28596: 112486-119286
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027380_130 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Jatropha curcas]
2 Hb_001300_150 0.0622566649 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
3 Hb_023344_120 0.0664973498 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Jatropha curcas]
4 Hb_000676_250 0.0680795096 - - PREDICTED: protein RTE1-HOMOLOG isoform X1 [Jatropha curcas]
5 Hb_001159_130 0.0685233136 - - PREDICTED: protein cornichon homolog 4 [Jatropha curcas]
6 Hb_065525_040 0.0688565352 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
7 Hb_000703_350 0.0740662519 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
8 Hb_000116_270 0.0741809862 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
9 Hb_002754_010 0.0756380756 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
10 Hb_084646_010 0.0766922195 - - hypothetical protein CICLE_v10031746mg [Citrus clementina]
11 Hb_155159_020 0.0798112932 - - PREDICTED: clathrin light chain 1-like [Jatropha curcas]
12 Hb_003177_030 0.0806088489 - - PREDICTED: uncharacterized protein LOC105635357 [Jatropha curcas]
13 Hb_004109_220 0.0816061428 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
14 Hb_001511_060 0.0830836733 - - PREDICTED: sorting and assembly machinery component 50 homolog [Jatropha curcas]
15 Hb_006455_120 0.0836893452 - - n6-DNA-methyltransferase, putative [Ricinus communis]
16 Hb_168978_010 0.0846114806 - - PREDICTED: uncharacterized protein LOC105630751 [Jatropha curcas]
17 Hb_000260_350 0.08549737 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000646_050 0.0855953815 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Jatropha curcas]
19 Hb_000465_160 0.08572384 - - PREDICTED: uncharacterized protein LOC105632297 [Jatropha curcas]
20 Hb_022115_020 0.0858957883 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_027380_130 Hb_027380_130 Hb_001300_150 Hb_001300_150 Hb_027380_130--Hb_001300_150 Hb_023344_120 Hb_023344_120 Hb_027380_130--Hb_023344_120 Hb_000676_250 Hb_000676_250 Hb_027380_130--Hb_000676_250 Hb_001159_130 Hb_001159_130 Hb_027380_130--Hb_001159_130 Hb_065525_040 Hb_065525_040 Hb_027380_130--Hb_065525_040 Hb_000703_350 Hb_000703_350 Hb_027380_130--Hb_000703_350 Hb_000465_160 Hb_000465_160 Hb_001300_150--Hb_000465_160 Hb_000375_350 Hb_000375_350 Hb_001300_150--Hb_000375_350 Hb_000599_250 Hb_000599_250 Hb_001300_150--Hb_000599_250 Hb_003582_060 Hb_003582_060 Hb_001300_150--Hb_003582_060 Hb_000260_030 Hb_000260_030 Hb_001300_150--Hb_000260_030 Hb_006634_070 Hb_006634_070 Hb_023344_120--Hb_006634_070 Hb_023344_120--Hb_000676_250 Hb_006455_120 Hb_006455_120 Hb_023344_120--Hb_006455_120 Hb_011995_010 Hb_011995_010 Hb_023344_120--Hb_011995_010 Hb_005269_070 Hb_005269_070 Hb_023344_120--Hb_005269_070 Hb_003177_030 Hb_003177_030 Hb_000676_250--Hb_003177_030 Hb_000019_030 Hb_000019_030 Hb_000676_250--Hb_000019_030 Hb_001711_020 Hb_001711_020 Hb_000676_250--Hb_001711_020 Hb_005144_160 Hb_005144_160 Hb_000676_250--Hb_005144_160 Hb_000116_270 Hb_000116_270 Hb_001159_130--Hb_000116_270 Hb_155159_020 Hb_155159_020 Hb_001159_130--Hb_155159_020 Hb_001159_130--Hb_003177_030 Hb_000603_150 Hb_000603_150 Hb_001159_130--Hb_000603_150 Hb_000200_020 Hb_000200_020 Hb_001159_130--Hb_000200_020 Hb_001159_130--Hb_000019_030 Hb_000732_010 Hb_000732_010 Hb_065525_040--Hb_000732_010 Hb_002754_010 Hb_002754_010 Hb_065525_040--Hb_002754_010 Hb_005054_110 Hb_005054_110 Hb_065525_040--Hb_005054_110 Hb_000331_550 Hb_000331_550 Hb_065525_040--Hb_000331_550 Hb_005463_100 Hb_005463_100 Hb_065525_040--Hb_005463_100 Hb_000069_310 Hb_000069_310 Hb_065525_040--Hb_000069_310 Hb_003605_090 Hb_003605_090 Hb_000703_350--Hb_003605_090 Hb_005846_040 Hb_005846_040 Hb_000703_350--Hb_005846_040 Hb_001902_140 Hb_001902_140 Hb_000703_350--Hb_001902_140 Hb_004109_170 Hb_004109_170 Hb_000703_350--Hb_004109_170 Hb_000703_350--Hb_001300_150 Hb_012019_010 Hb_012019_010 Hb_000703_350--Hb_012019_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.1975 37.5176 46.2295 75.1792 39.4102 42.9015
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.3229 56.571 79.7305 47.7782 41.5702

CAGE analysis