Hb_011310_070

Information

Type -
Description -
Location Contig11310: 23233-26613
Sequence    

Annotation

kegg
ID rcu:RCOM_0924410
description ADP,ATP carrier protein, putative
nr
ID XP_002515534.1
description ADP,ATP carrier protein, putative [Ricinus communis]
swissprot
ID Q9SUV1
description Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1
trembl
ID B9RP65
description ADP,ATP carrier protein, putative OS=Ricinus communis GN=RCOM_0924410 PE=3 SV=1
Gene Ontology
ID GO:0009941
description adenine nucleotide transporter chloroplastic mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03904: 23354-26557
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011310_070 0.0 - - ADP,ATP carrier protein, putative [Ricinus communis]
2 Hb_009111_050 0.077152068 transcription factor TF Family: Jumonji PREDICTED: pentatricopeptide repeat-containing protein At5g06540 [Populus euphratica]
3 Hb_006788_070 0.082598737 - - 2-methyl-6-geranylgeranylbenzoquinone methyltranferase [Hevea brasiliensis]
4 Hb_001454_210 0.0835952458 - - PREDICTED: uncharacterized protein LOC105643435 [Jatropha curcas]
5 Hb_008066_010 0.0848291623 - - PREDICTED: translation initiation factor eIF-2B subunit alpha-like [Jatropha curcas]
6 Hb_000029_030 0.0915360083 - - PREDICTED: mitochondrial fission protein ELM1 [Jatropha curcas]
7 Hb_071736_010 0.0935374494 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
8 Hb_005754_060 0.0943371245 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000023_140 0.0944147082 - - PREDICTED: cadmium-induced protein AS8 isoform X1 [Jatropha curcas]
10 Hb_004055_140 0.0953211195 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
11 Hb_001771_090 0.0960843236 - - PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas]
12 Hb_001855_010 0.0964795332 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
13 Hb_005062_070 0.0985450128 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]
14 Hb_001135_160 0.0991538055 - - PREDICTED: elongator complex protein 6 [Jatropha curcas]
15 Hb_000696_110 0.0994978533 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
16 Hb_133271_020 0.1000842033 - - prohibitin, putative [Ricinus communis]
17 Hb_005063_040 0.1006041701 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Jatropha curcas]
18 Hb_001295_020 0.1012936592 - - Uncharacterized protein TCM_027312 [Theobroma cacao]
19 Hb_015306_020 0.1022340562 transcription factor TF Family: MYB-related PREDICTED: dnaJ homolog subfamily C member 2 [Jatropha curcas]
20 Hb_028872_140 0.1027363423 - - PREDICTED: uncharacterized protein LOC105644767 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_011310_070 Hb_011310_070 Hb_009111_050 Hb_009111_050 Hb_011310_070--Hb_009111_050 Hb_006788_070 Hb_006788_070 Hb_011310_070--Hb_006788_070 Hb_001454_210 Hb_001454_210 Hb_011310_070--Hb_001454_210 Hb_008066_010 Hb_008066_010 Hb_011310_070--Hb_008066_010 Hb_000029_030 Hb_000029_030 Hb_011310_070--Hb_000029_030 Hb_071736_010 Hb_071736_010 Hb_011310_070--Hb_071736_010 Hb_028872_140 Hb_028872_140 Hb_009111_050--Hb_028872_140 Hb_033642_010 Hb_033642_010 Hb_009111_050--Hb_033642_010 Hb_001030_120 Hb_001030_120 Hb_009111_050--Hb_001030_120 Hb_009111_050--Hb_001454_210 Hb_000190_140 Hb_000190_140 Hb_009111_050--Hb_000190_140 Hb_015306_020 Hb_015306_020 Hb_009111_050--Hb_015306_020 Hb_000175_070 Hb_000175_070 Hb_006788_070--Hb_000175_070 Hb_000023_140 Hb_000023_140 Hb_006788_070--Hb_000023_140 Hb_009558_020 Hb_009558_020 Hb_006788_070--Hb_009558_020 Hb_005063_040 Hb_005063_040 Hb_006788_070--Hb_005063_040 Hb_007193_100 Hb_007193_100 Hb_006788_070--Hb_007193_100 Hb_001454_210--Hb_015306_020 Hb_001454_210--Hb_028872_140 Hb_005062_070 Hb_005062_070 Hb_001454_210--Hb_005062_070 Hb_002811_360 Hb_002811_360 Hb_001454_210--Hb_002811_360 Hb_001454_210--Hb_001030_120 Hb_000110_160 Hb_000110_160 Hb_008066_010--Hb_000110_160 Hb_001329_300 Hb_001329_300 Hb_008066_010--Hb_001329_300 Hb_000069_460 Hb_000069_460 Hb_008066_010--Hb_000069_460 Hb_010710_030 Hb_010710_030 Hb_008066_010--Hb_010710_030 Hb_000221_270 Hb_000221_270 Hb_008066_010--Hb_000221_270 Hb_000567_260 Hb_000567_260 Hb_008066_010--Hb_000567_260 Hb_002368_050 Hb_002368_050 Hb_000029_030--Hb_002368_050 Hb_006693_030 Hb_006693_030 Hb_000029_030--Hb_006693_030 Hb_001776_110 Hb_001776_110 Hb_000029_030--Hb_001776_110 Hb_000975_290 Hb_000975_290 Hb_000029_030--Hb_000975_290 Hb_000029_030--Hb_001454_210 Hb_011224_080 Hb_011224_080 Hb_000029_030--Hb_011224_080 Hb_005883_050 Hb_005883_050 Hb_071736_010--Hb_005883_050 Hb_005754_060 Hb_005754_060 Hb_071736_010--Hb_005754_060 Hb_071736_010--Hb_000023_140 Hb_001266_080 Hb_001266_080 Hb_071736_010--Hb_001266_080 Hb_002616_050 Hb_002616_050 Hb_071736_010--Hb_002616_050 Hb_001855_010 Hb_001855_010 Hb_071736_010--Hb_001855_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.9648 5.0631 7.73169 8.92309 27.1047 53.3334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.274 29.4293 41.2906 19.6217 11.8349

CAGE analysis