Hb_010883_220

Information

Type -
Description -
Location Contig10883: 163144-164363
Sequence    

Annotation

kegg
ID pmum:103332906
description flavonol synthase/flavanone 3-hydroxylase-like
nr
ID XP_008233895.1
description PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Prunus mume]
swissprot
ID Q9ZWQ9
description Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1
trembl
ID B6A7R4
description Flavonol synthase OS=Camellia sinensis GN=FLS PE=2 SV=1
Gene Ontology
ID GO:0045431
description flavonol synthase flavanone 3-hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010883_220 0.0 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Prunus mume]
2 Hb_009543_040 0.1786094816 - - -
3 Hb_000751_210 0.1806911675 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
4 Hb_005203_010 0.1822665199 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
5 Hb_132438_010 0.1826465751 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
6 Hb_004218_230 0.1834129222 - - Peptide transporter, putative [Ricinus communis]
7 Hb_000575_010 0.18541619 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
8 Hb_000616_060 0.1863659415 - - -
9 Hb_027445_080 0.1868230639 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
10 Hb_000891_060 0.1870860738 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
11 Hb_002282_030 0.1885269337 - - -
12 Hb_105446_010 0.191156816 - - -
13 Hb_000504_050 0.1950444258 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
14 Hb_017661_020 0.1981945493 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
15 Hb_009252_110 0.1996153402 - - hypothetical protein JCGZ_11492 [Jatropha curcas]
16 Hb_031862_090 0.2014852692 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
17 Hb_001157_130 0.2024493562 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
18 Hb_000127_070 0.2025432006 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
19 Hb_002762_070 0.2031504917 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
20 Hb_004837_170 0.2035424223 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]

Gene co-expression network

sample Hb_010883_220 Hb_010883_220 Hb_009543_040 Hb_009543_040 Hb_010883_220--Hb_009543_040 Hb_000751_210 Hb_000751_210 Hb_010883_220--Hb_000751_210 Hb_005203_010 Hb_005203_010 Hb_010883_220--Hb_005203_010 Hb_132438_010 Hb_132438_010 Hb_010883_220--Hb_132438_010 Hb_004218_230 Hb_004218_230 Hb_010883_220--Hb_004218_230 Hb_000575_010 Hb_000575_010 Hb_010883_220--Hb_000575_010 Hb_009543_040--Hb_132438_010 Hb_009543_040--Hb_000751_210 Hb_009543_040--Hb_000575_010 Hb_000616_060 Hb_000616_060 Hb_009543_040--Hb_000616_060 Hb_001157_130 Hb_001157_130 Hb_009543_040--Hb_001157_130 Hb_000891_060 Hb_000891_060 Hb_009543_040--Hb_000891_060 Hb_000751_210--Hb_132438_010 Hb_105446_010 Hb_105446_010 Hb_000751_210--Hb_105446_010 Hb_017866_010 Hb_017866_010 Hb_000751_210--Hb_017866_010 Hb_112011_010 Hb_112011_010 Hb_000751_210--Hb_112011_010 Hb_000751_210--Hb_001157_130 Hb_031862_090 Hb_031862_090 Hb_005203_010--Hb_031862_090 Hb_027445_080 Hb_027445_080 Hb_005203_010--Hb_027445_080 Hb_002282_030 Hb_002282_030 Hb_005203_010--Hb_002282_030 Hb_005203_010--Hb_000891_060 Hb_005203_010--Hb_000616_060 Hb_005203_010--Hb_000575_010 Hb_132438_010--Hb_017866_010 Hb_132438_010--Hb_001157_130 Hb_132438_010--Hb_105446_010 Hb_132438_010--Hb_000575_010 Hb_000127_070 Hb_000127_070 Hb_004218_230--Hb_000127_070 Hb_000504_050 Hb_000504_050 Hb_004218_230--Hb_000504_050 Hb_002110_210 Hb_002110_210 Hb_004218_230--Hb_002110_210 Hb_002735_010 Hb_002735_010 Hb_004218_230--Hb_002735_010 Hb_004218_230--Hb_027445_080 Hb_017661_020 Hb_017661_020 Hb_004218_230--Hb_017661_020 Hb_000575_010--Hb_000616_060 Hb_000575_010--Hb_000891_060 Hb_000575_010--Hb_002282_030 Hb_000575_010--Hb_001157_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0443066 0.610312 0 0.569505 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0399063 0 0.320971 0

CAGE analysis