Hb_007617_050

Information

Type -
Description -
Location Contig7617: 37031-43630
Sequence    

Annotation

kegg
ID rcu:RCOM_1447440
description Isoflavone reductase, putative (EC:1.3.1.45)
nr
ID XP_002512917.1
description Isoflavone reductase, putative [Ricinus communis]
swissprot
ID E1U332
description Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1
trembl
ID B9RH58
description Isoflavone reductase, putative OS=Ricinus communis GN=RCOM_1447440 PE=4 SV=1
Gene Ontology
ID GO:0010283
description isoflavone reductase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57292: 37205-40157 , PASA_asmbl_57293: 38416-38518
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007617_050 0.0 - - Isoflavone reductase, putative [Ricinus communis]
2 Hb_002890_140 0.0864892186 - - PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
3 Hb_032717_080 0.0901148183 - - gamma-soluble nsf attachment protein, putative [Ricinus communis]
4 Hb_000116_440 0.091962541 - - PREDICTED: eukaryotic translation initiation factor 6-2 [Jatropha curcas]
5 Hb_011310_190 0.0923680958 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
6 Hb_002105_090 0.092712158 - - Rab4 [Hevea brasiliensis]
7 Hb_000103_090 0.0933985431 - - PREDICTED: protein RDM1 [Jatropha curcas]
8 Hb_003874_020 0.0977858346 - - hypothetical protein POPTR_0012s02280g [Populus trichocarpa]
9 Hb_005389_150 0.0983123524 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001329_220 0.0996905029 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003266_050 0.1013821744 - - PREDICTED: small nuclear ribonucleoprotein Sm D1 [Amborella trichopoda]
12 Hb_003011_040 0.1014389334 - - PREDICTED: uncharacterized protein LOC102629536 isoform X2 [Citrus sinensis]
13 Hb_009954_040 0.1015993495 - - PREDICTED: putative golgin subfamily A member 6-like protein 6 [Jatropha curcas]
14 Hb_001221_410 0.1017853009 - - PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial [Jatropha curcas]
15 Hb_000832_140 0.1025226187 - - actin depolymerizing factor 4 [Hevea brasiliensis]
16 Hb_003392_040 0.1046953536 - - PREDICTED: D-aminoacyl-tRNA deacylase [Jatropha curcas]
17 Hb_003058_130 0.1053847843 - - PREDICTED: protein N-lysine methyltransferase METTL21A isoform X1 [Jatropha curcas]
18 Hb_010436_070 0.1057701844 - - PREDICTED: endoribonuclease Dicer homolog 4-like [Nicotiana tomentosiformis]
19 Hb_000169_010 0.106237519 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
20 Hb_001824_070 0.1072798501 - - H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_007617_050 Hb_007617_050 Hb_002890_140 Hb_002890_140 Hb_007617_050--Hb_002890_140 Hb_032717_080 Hb_032717_080 Hb_007617_050--Hb_032717_080 Hb_000116_440 Hb_000116_440 Hb_007617_050--Hb_000116_440 Hb_011310_190 Hb_011310_190 Hb_007617_050--Hb_011310_190 Hb_002105_090 Hb_002105_090 Hb_007617_050--Hb_002105_090 Hb_000103_090 Hb_000103_090 Hb_007617_050--Hb_000103_090 Hb_000815_040 Hb_000815_040 Hb_002890_140--Hb_000815_040 Hb_002890_140--Hb_000103_090 Hb_000103_560 Hb_000103_560 Hb_002890_140--Hb_000103_560 Hb_000529_190 Hb_000529_190 Hb_002890_140--Hb_000529_190 Hb_033834_040 Hb_033834_040 Hb_002890_140--Hb_033834_040 Hb_000832_140 Hb_000832_140 Hb_002890_140--Hb_000832_140 Hb_032717_080--Hb_000103_090 Hb_032717_080--Hb_011310_190 Hb_004048_070 Hb_004048_070 Hb_032717_080--Hb_004048_070 Hb_007254_040 Hb_007254_040 Hb_032717_080--Hb_007254_040 Hb_000613_140 Hb_000613_140 Hb_032717_080--Hb_000613_140 Hb_032717_080--Hb_002105_090 Hb_000220_220 Hb_000220_220 Hb_000116_440--Hb_000220_220 Hb_000116_440--Hb_000103_090 Hb_002893_080 Hb_002893_080 Hb_000116_440--Hb_002893_080 Hb_000003_080 Hb_000003_080 Hb_000116_440--Hb_000003_080 Hb_000116_440--Hb_002890_140 Hb_000116_440--Hb_032717_080 Hb_011310_190--Hb_007254_040 Hb_005398_030 Hb_005398_030 Hb_011310_190--Hb_005398_030 Hb_007317_180 Hb_007317_180 Hb_011310_190--Hb_007317_180 Hb_001221_410 Hb_001221_410 Hb_011310_190--Hb_001221_410 Hb_011310_190--Hb_000103_090 Hb_000494_020 Hb_000494_020 Hb_002105_090--Hb_000494_020 Hb_004324_310 Hb_004324_310 Hb_002105_090--Hb_004324_310 Hb_070986_010 Hb_070986_010 Hb_002105_090--Hb_070986_010 Hb_001184_090 Hb_001184_090 Hb_002105_090--Hb_001184_090 Hb_010407_040 Hb_010407_040 Hb_002105_090--Hb_010407_040 Hb_000103_090--Hb_033834_040 Hb_004128_190 Hb_004128_190 Hb_000103_090--Hb_004128_190 Hb_002477_330 Hb_002477_330 Hb_000103_090--Hb_002477_330 Hb_000103_090--Hb_000529_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.3439 1.59264 1.66565 5.08108 7.04178 8.57734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.7459 10.168 4.00584 4.9961 2.38597

CAGE analysis