Hb_006452_060

Information

Type -
Description -
Location Contig6452: 26479-27800
Sequence    

Annotation

kegg
ID rcu:RCOM_0699150
description transferase, transferring glycosyl groups, putative (EC:2.4.1.134)
nr
ID XP_002520170.1
description transferase, transferring glycosyl groups, putative [Ricinus communis]
swissprot
ID Q9LV16
description Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2
trembl
ID B9S2F1
description Transferase, transferring glycosyl groups, putative OS=Ricinus communis GN=RCOM_0699150 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable beta- -galactosyltransferase 19

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006452_060 0.0 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
2 Hb_001220_040 0.099415408 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
3 Hb_000291_210 0.1179122386 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
4 Hb_030620_010 0.1193069595 - - -
5 Hb_000085_310 0.1247569742 - - hypothetical protein JCGZ_00974 [Jatropha curcas]
6 Hb_030982_040 0.1249260659 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
7 Hb_000436_050 0.1293772248 - - PREDICTED: INO80 complex subunit C [Jatropha curcas]
8 Hb_005333_040 0.1299494919 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
9 Hb_000809_050 0.1320511956 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639663 isoform X2 [Jatropha curcas]
10 Hb_000072_280 0.1340611066 - - PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2-like [Jatropha curcas]
11 Hb_001191_100 0.1378052678 - - F-actin capping protein beta subunit [Populus trichocarpa]
12 Hb_004204_190 0.1397719139 - - putative iron-sulfur cluster biosynthesis protein Isd11 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
13 Hb_143629_050 0.1421519016 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002973_080 0.1434957893 - - PREDICTED: uncharacterized protein LOC105630313 [Jatropha curcas]
15 Hb_004650_070 0.1447559576 - - -
16 Hb_000340_430 0.1447713461 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_007760_030 0.1459790766 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
18 Hb_000252_040 0.1462790436 - - PREDICTED: uncharacterized protein LOC105140231 [Populus euphratica]
19 Hb_000329_690 0.1481954122 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
20 Hb_002659_140 0.1492683346 - - hypothetical protein JCGZ_08031 [Jatropha curcas]

Gene co-expression network

sample Hb_006452_060 Hb_006452_060 Hb_001220_040 Hb_001220_040 Hb_006452_060--Hb_001220_040 Hb_000291_210 Hb_000291_210 Hb_006452_060--Hb_000291_210 Hb_030620_010 Hb_030620_010 Hb_006452_060--Hb_030620_010 Hb_000085_310 Hb_000085_310 Hb_006452_060--Hb_000085_310 Hb_030982_040 Hb_030982_040 Hb_006452_060--Hb_030982_040 Hb_000436_050 Hb_000436_050 Hb_006452_060--Hb_000436_050 Hb_005348_080 Hb_005348_080 Hb_001220_040--Hb_005348_080 Hb_180992_010 Hb_180992_010 Hb_001220_040--Hb_180992_010 Hb_001220_040--Hb_000085_310 Hb_000340_430 Hb_000340_430 Hb_001220_040--Hb_000340_430 Hb_002662_100 Hb_002662_100 Hb_001220_040--Hb_002662_100 Hb_000008_250 Hb_000008_250 Hb_000291_210--Hb_000008_250 Hb_000291_210--Hb_000436_050 Hb_002973_080 Hb_002973_080 Hb_000291_210--Hb_002973_080 Hb_000634_100 Hb_000634_100 Hb_000291_210--Hb_000634_100 Hb_000402_200 Hb_000402_200 Hb_000291_210--Hb_000402_200 Hb_004223_230 Hb_004223_230 Hb_030620_010--Hb_004223_230 Hb_102864_010 Hb_102864_010 Hb_030620_010--Hb_102864_010 Hb_000329_690 Hb_000329_690 Hb_030620_010--Hb_000329_690 Hb_000117_040 Hb_000117_040 Hb_030620_010--Hb_000117_040 Hb_002200_110 Hb_002200_110 Hb_030620_010--Hb_002200_110 Hb_001366_220 Hb_001366_220 Hb_000085_310--Hb_001366_220 Hb_004108_050 Hb_004108_050 Hb_000085_310--Hb_004108_050 Hb_000809_040 Hb_000809_040 Hb_000085_310--Hb_000809_040 Hb_001366_230 Hb_001366_230 Hb_000085_310--Hb_001366_230 Hb_000085_310--Hb_002662_100 Hb_005357_150 Hb_005357_150 Hb_000085_310--Hb_005357_150 Hb_005653_120 Hb_005653_120 Hb_030982_040--Hb_005653_120 Hb_000809_050 Hb_000809_050 Hb_030982_040--Hb_000809_050 Hb_015974_010 Hb_015974_010 Hb_030982_040--Hb_015974_010 Hb_000072_280 Hb_000072_280 Hb_030982_040--Hb_000072_280 Hb_001102_010 Hb_001102_010 Hb_030982_040--Hb_001102_010 Hb_000436_050--Hb_000008_250 Hb_000436_050--Hb_000634_100 Hb_000056_340 Hb_000056_340 Hb_000436_050--Hb_000056_340 Hb_002205_080 Hb_002205_080 Hb_000436_050--Hb_002205_080 Hb_023386_080 Hb_023386_080 Hb_000436_050--Hb_023386_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.03226 0.0790611 0.182567 0.0546661 2.00235 0.734579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08338 1.4375 1.34799 0.172414 0.106847

CAGE analysis