Hb_004705_100

Information

Type -
Description -
Location Contig4705: 115135-118250
Sequence    

Annotation

kegg
ID pop:POPTR_0003s16180g
description POPTRDRAFT_414453; hypothetical protein
nr
ID XP_012088723.1
description PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]
swissprot
ID Q9LYU7
description Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana GN=CRN PE=1 SV=1
trembl
ID A0A067JUS1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23102 PE=4 SV=1
Gene Ontology
ID GO:0004672
description inactive leucine-rich repeat receptor-like protein kinase coryne

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44241: 115378-118125
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004705_100 0.0 - - PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]
2 Hb_005686_060 0.0587664916 - - PREDICTED: uncharacterized protein LOC101508199 [Cicer arietinum]
3 Hb_092337_010 0.0784903628 - - PREDICTED: actin-depolymerizing factor 2-like [Nelumbo nucifera]
4 Hb_010172_080 0.082889139 - - acetylglucosaminyltransferase, putative [Ricinus communis]
5 Hb_000700_110 0.0846976109 - - Vesicle-associated membrane protein, putative [Ricinus communis]
6 Hb_000692_220 0.0854146215 - - hypothetical protein B456_002G120900 [Gossypium raimondii]
7 Hb_009773_020 0.0872393379 - - PREDICTED: molybdopterin synthase sulfur carrier subunit [Jatropha curcas]
8 Hb_001205_150 0.0891559068 - - Uncharacterized protein TCM_000403 [Theobroma cacao]
9 Hb_001700_030 0.0901222133 transcription factor TF Family: ULT PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
10 Hb_004738_100 0.0908688796 - - PREDICTED: 14-3-3-like protein D-like isoform X1 [Citrus sinensis]
11 Hb_029866_040 0.0912443012 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
12 Hb_003092_030 0.0917419993 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
13 Hb_002078_150 0.0926596697 - - protein with unknown function [Ricinus communis]
14 Hb_000705_210 0.0927287194 - - PREDICTED: ras-related protein Rab2BV [Jatropha curcas]
15 Hb_004306_020 0.093957859 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
16 Hb_010174_020 0.0940944935 - - protein binding protein, putative [Ricinus communis]
17 Hb_004724_420 0.0945510354 - - fucose synthetase, putative [Ricinus communis]
18 Hb_002477_330 0.0954578405 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
19 Hb_005289_030 0.0969074864 - - PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Jatropha curcas]
20 Hb_010504_020 0.0985159137 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]

Gene co-expression network

sample Hb_004705_100 Hb_004705_100 Hb_005686_060 Hb_005686_060 Hb_004705_100--Hb_005686_060 Hb_092337_010 Hb_092337_010 Hb_004705_100--Hb_092337_010 Hb_010172_080 Hb_010172_080 Hb_004705_100--Hb_010172_080 Hb_000700_110 Hb_000700_110 Hb_004705_100--Hb_000700_110 Hb_000692_220 Hb_000692_220 Hb_004705_100--Hb_000692_220 Hb_009773_020 Hb_009773_020 Hb_004705_100--Hb_009773_020 Hb_000045_090 Hb_000045_090 Hb_005686_060--Hb_000045_090 Hb_005686_060--Hb_010172_080 Hb_005686_060--Hb_009773_020 Hb_000510_130 Hb_000510_130 Hb_005686_060--Hb_000510_130 Hb_002078_150 Hb_002078_150 Hb_005686_060--Hb_002078_150 Hb_004738_100 Hb_004738_100 Hb_092337_010--Hb_004738_100 Hb_092337_010--Hb_000692_220 Hb_001936_010 Hb_001936_010 Hb_092337_010--Hb_001936_010 Hb_003108_020 Hb_003108_020 Hb_092337_010--Hb_003108_020 Hb_000125_100 Hb_000125_100 Hb_092337_010--Hb_000125_100 Hb_002774_060 Hb_002774_060 Hb_010172_080--Hb_002774_060 Hb_010172_080--Hb_009773_020 Hb_010172_080--Hb_002078_150 Hb_004324_310 Hb_004324_310 Hb_010172_080--Hb_004324_310 Hb_148644_010 Hb_148644_010 Hb_000700_110--Hb_148644_010 Hb_003092_030 Hb_003092_030 Hb_000700_110--Hb_003092_030 Hb_000041_050 Hb_000041_050 Hb_000700_110--Hb_000041_050 Hb_000347_200 Hb_000347_200 Hb_000700_110--Hb_000347_200 Hb_006198_080 Hb_006198_080 Hb_000700_110--Hb_006198_080 Hb_002477_330 Hb_002477_330 Hb_000700_110--Hb_002477_330 Hb_001205_150 Hb_001205_150 Hb_000692_220--Hb_001205_150 Hb_000479_190 Hb_000479_190 Hb_000692_220--Hb_000479_190 Hb_010174_020 Hb_010174_020 Hb_000692_220--Hb_010174_020 Hb_002375_070 Hb_002375_070 Hb_000692_220--Hb_002375_070 Hb_003125_010 Hb_003125_010 Hb_000692_220--Hb_003125_010 Hb_002030_040 Hb_002030_040 Hb_009773_020--Hb_002030_040 Hb_065525_020 Hb_065525_020 Hb_009773_020--Hb_065525_020 Hb_000103_560 Hb_000103_560 Hb_009773_020--Hb_000103_560 Hb_000840_030 Hb_000840_030 Hb_009773_020--Hb_000840_030 Hb_001105_070 Hb_001105_070 Hb_009773_020--Hb_001105_070 Hb_002301_140 Hb_002301_140 Hb_009773_020--Hb_002301_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.02709 4.54179 2.26219 11.0126 7.29748 11.8337
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.8633 14.1451 13.0185 4.95718 2.71133

CAGE analysis