Hb_004669_040

Information

Type -
Description -
Location Contig4669: 75103-76279
Sequence    

Annotation

kegg
ID rcu:RCOM_1540860
description ATPase inhibitor, putative
nr
ID XP_002515764.1
description ATPase inhibitor, putative [Ricinus communis]
swissprot
ID Q9ZUX4
description Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1
trembl
ID B9RPU5
description ATPase inhibitor, putative OS=Ricinus communis GN=RCOM_1540860 PE=4 SV=1
Gene Ontology
ID GO:0005739
description f1f0-atpase inhibitor protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44110: 61336-76224
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004669_040 0.0 - - ATPase inhibitor, putative [Ricinus communis]
2 Hb_000771_160 0.1038103713 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
3 Hb_005410_010 0.1307999001 transcription factor TF Family: HSF hypothetical protein JCGZ_07655 [Jatropha curcas]
4 Hb_007111_040 0.1335627743 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
5 Hb_002405_020 0.1352910711 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
6 Hb_000025_310 0.1392334396 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000210_130 0.1426850767 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
8 Hb_001477_010 0.1438142622 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
9 Hb_000988_050 0.1438231086 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001623_580 0.1482298539 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
11 Hb_050964_020 0.1510669281 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC1-like [Populus euphratica]
12 Hb_154381_050 0.1511079931 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000237_230 0.1517736876 - - PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Jatropha curcas]
14 Hb_001846_080 0.1518173617 - - PREDICTED: poly(rC)-binding protein 3-like [Nicotiana sylvestris]
15 Hb_128548_020 0.15195366 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
16 Hb_000940_040 0.1527671503 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
17 Hb_000185_090 0.1529619134 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
18 Hb_019871_020 0.1537590696 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
19 Hb_000395_140 0.1537682563 - - Oligopeptide transporter, putative [Ricinus communis]
20 Hb_000256_270 0.153979729 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004669_040 Hb_004669_040 Hb_000771_160 Hb_000771_160 Hb_004669_040--Hb_000771_160 Hb_005410_010 Hb_005410_010 Hb_004669_040--Hb_005410_010 Hb_007111_040 Hb_007111_040 Hb_004669_040--Hb_007111_040 Hb_002405_020 Hb_002405_020 Hb_004669_040--Hb_002405_020 Hb_000025_310 Hb_000025_310 Hb_004669_040--Hb_000025_310 Hb_000210_130 Hb_000210_130 Hb_004669_040--Hb_000210_130 Hb_000771_160--Hb_002405_020 Hb_113216_010 Hb_113216_010 Hb_000771_160--Hb_113216_010 Hb_000185_090 Hb_000185_090 Hb_000771_160--Hb_000185_090 Hb_001582_030 Hb_001582_030 Hb_000771_160--Hb_001582_030 Hb_009615_110 Hb_009615_110 Hb_000771_160--Hb_009615_110 Hb_012654_020 Hb_012654_020 Hb_005410_010--Hb_012654_020 Hb_002172_030 Hb_002172_030 Hb_005410_010--Hb_002172_030 Hb_154381_050 Hb_154381_050 Hb_005410_010--Hb_154381_050 Hb_002149_040 Hb_002149_040 Hb_005410_010--Hb_002149_040 Hb_001846_080 Hb_001846_080 Hb_005410_010--Hb_001846_080 Hb_000161_030 Hb_000161_030 Hb_005410_010--Hb_000161_030 Hb_011644_020 Hb_011644_020 Hb_007111_040--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007111_040--Hb_019871_020 Hb_000392_280 Hb_000392_280 Hb_007111_040--Hb_000392_280 Hb_000300_540 Hb_000300_540 Hb_007111_040--Hb_000300_540 Hb_006029_010 Hb_006029_010 Hb_007111_040--Hb_006029_010 Hb_000684_180 Hb_000684_180 Hb_007111_040--Hb_000684_180 Hb_002405_020--Hb_002149_040 Hb_001357_190 Hb_001357_190 Hb_002405_020--Hb_001357_190 Hb_001016_060 Hb_001016_060 Hb_002405_020--Hb_001016_060 Hb_006173_020 Hb_006173_020 Hb_002405_020--Hb_006173_020 Hb_002405_020--Hb_005410_010 Hb_188964_010 Hb_188964_010 Hb_000025_310--Hb_188964_010 Hb_000025_310--Hb_001582_030 Hb_007441_070 Hb_007441_070 Hb_000025_310--Hb_007441_070 Hb_000025_310--Hb_000771_160 Hb_003581_020 Hb_003581_020 Hb_000025_310--Hb_003581_020 Hb_000025_310--Hb_019871_020 Hb_000210_130--Hb_007111_040 Hb_001628_110 Hb_001628_110 Hb_000210_130--Hb_001628_110 Hb_000210_130--Hb_005410_010 Hb_000210_130--Hb_154381_050 Hb_000210_130--Hb_002172_030 Hb_001623_580 Hb_001623_580 Hb_000210_130--Hb_001623_580
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
236.944 74.523 10.8373 47.1212 730.924 592.808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
255.389 195.812 108.964 90.5547 20.9391

CAGE analysis