Hb_004241_220

Information

Type -
Description -
Location Contig4241: 209422-209958
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004241_220 0.0 - - -
2 Hb_094730_010 0.0341560107 - - hypothetical protein JCGZ_04374 [Jatropha curcas]
3 Hb_000680_040 0.1451269349 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
4 Hb_000375_270 0.1635240365 - - -
5 Hb_109358_010 0.1727821219 - - -
6 Hb_003549_060 0.2005460499 - - PREDICTED: importin subunit alpha-1a-like isoform X3 [Gossypium raimondii]
7 Hb_001433_060 0.229217026 - - hypothetical protein JCGZ_23291 [Jatropha curcas]
8 Hb_001184_120 0.2319543332 - - hypothetical protein CICLE_v10025281mg [Citrus clementina]
9 Hb_148146_030 0.2612642901 - - PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]
10 Hb_000156_170 0.2652201452 - - PREDICTED: pentatricopeptide repeat-containing protein At3g14730 [Prunus mume]
11 Hb_023226_050 0.2719428944 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
12 Hb_000006_020 0.2750261302 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000015_240 0.2750261302 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000016_090 0.2750261302 - - -
15 Hb_000016_240 0.2750261302 transcription factor TF Family: LOB hypothetical protein POPTR_0012s13910g [Populus trichocarpa]
16 Hb_000028_020 0.2750261302 - - -
17 Hb_000028_300 0.2750261302 - - hypothetical protein 0_13835_01, partial [Pinus radiata]
18 Hb_000031_310 0.2750261302 transcription factor TF Family: Orphans hypothetical protein [Trichormus azollae]
19 Hb_000037_100 0.2750261302 - - nucleic acid binding protein, putative [Ricinus communis]
20 Hb_000045_030 0.2750261302 - - -

Gene co-expression network

sample Hb_004241_220 Hb_004241_220 Hb_094730_010 Hb_094730_010 Hb_004241_220--Hb_094730_010 Hb_000680_040 Hb_000680_040 Hb_004241_220--Hb_000680_040 Hb_000375_270 Hb_000375_270 Hb_004241_220--Hb_000375_270 Hb_109358_010 Hb_109358_010 Hb_004241_220--Hb_109358_010 Hb_003549_060 Hb_003549_060 Hb_004241_220--Hb_003549_060 Hb_001433_060 Hb_001433_060 Hb_004241_220--Hb_001433_060 Hb_094730_010--Hb_000375_270 Hb_094730_010--Hb_003549_060 Hb_094730_010--Hb_000680_040 Hb_094730_010--Hb_109358_010 Hb_148146_030 Hb_148146_030 Hb_094730_010--Hb_148146_030 Hb_000680_040--Hb_001433_060 Hb_001184_120 Hb_001184_120 Hb_000680_040--Hb_001184_120 Hb_000680_040--Hb_109358_010 Hb_000200_260 Hb_000200_260 Hb_000680_040--Hb_000200_260 Hb_000006_020 Hb_000006_020 Hb_000375_270--Hb_000006_020 Hb_000015_240 Hb_000015_240 Hb_000375_270--Hb_000015_240 Hb_000016_090 Hb_000016_090 Hb_000375_270--Hb_000016_090 Hb_000016_240 Hb_000016_240 Hb_000375_270--Hb_000016_240 Hb_000028_020 Hb_000028_020 Hb_000375_270--Hb_000028_020 Hb_109358_010--Hb_001433_060 Hb_109358_010--Hb_001184_120 Hb_000866_360 Hb_000866_360 Hb_109358_010--Hb_000866_360 Hb_003549_060--Hb_000375_270 Hb_003398_110 Hb_003398_110 Hb_003549_060--Hb_003398_110 Hb_000129_060 Hb_000129_060 Hb_003549_060--Hb_000129_060 Hb_004019_130 Hb_004019_130 Hb_003549_060--Hb_004019_130 Hb_162008_030 Hb_162008_030 Hb_003549_060--Hb_162008_030 Hb_001546_100 Hb_001546_100 Hb_003549_060--Hb_001546_100 Hb_001433_060--Hb_001184_120 Hb_001433_060--Hb_000200_260 Hb_000212_340 Hb_000212_340 Hb_001433_060--Hb_000212_340 Hb_008014_080 Hb_008014_080 Hb_001433_060--Hb_008014_080 Hb_072639_010 Hb_072639_010 Hb_001433_060--Hb_072639_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.355389 0 0.0594427 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis