Hb_000200_260

Information

Type -
Description -
Location Contig200: 304125-307949
Sequence    

Annotation

kegg
ID sot:102596491
description uncharacterized LOC102596491
nr
ID XP_009784049.1
description PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID A0A067KID3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14824 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20219: 307093-307907
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000200_260 0.0 - - PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
2 Hb_000212_340 0.0038933775 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008014_080 0.0049892244 - - PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]
4 Hb_072639_010 0.0060890739 - - JHL22C18.10 [Jatropha curcas]
5 Hb_000053_090 0.0062618695 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Populus euphratica]
6 Hb_000445_340 0.0101173247 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003866_010 0.0189134349 - - Polyprotein, putative [Solanum demissum]
8 Hb_003492_030 0.0721563265 - - -
9 Hb_000163_120 0.1027525192 - - -
10 Hb_000465_200 0.1376698441 - - PREDICTED: protein NSP-INTERACTING KINASE 1 [Jatropha curcas]
11 Hb_001184_120 0.1437144148 - - hypothetical protein CICLE_v10025281mg [Citrus clementina]
12 Hb_002001_040 0.1441302202 - - hypothetical protein CISIN_1g044945mg, partial [Citrus sinensis]
13 Hb_000207_410 0.1458634815 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001433_060 0.1465036174 - - hypothetical protein JCGZ_23291 [Jatropha curcas]
15 Hb_000537_110 0.1466201985 - - -
16 Hb_000680_040 0.2310714032 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_109358_010 0.3179387513 - - -
18 Hb_040948_020 0.3282495693 - - -
19 Hb_034589_010 0.3302809446 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
20 Hb_001825_050 0.3468689576 - - -

Gene co-expression network

sample Hb_000200_260 Hb_000200_260 Hb_000212_340 Hb_000212_340 Hb_000200_260--Hb_000212_340 Hb_008014_080 Hb_008014_080 Hb_000200_260--Hb_008014_080 Hb_072639_010 Hb_072639_010 Hb_000200_260--Hb_072639_010 Hb_000053_090 Hb_000053_090 Hb_000200_260--Hb_000053_090 Hb_000445_340 Hb_000445_340 Hb_000200_260--Hb_000445_340 Hb_003866_010 Hb_003866_010 Hb_000200_260--Hb_003866_010 Hb_000212_340--Hb_008014_080 Hb_000212_340--Hb_072639_010 Hb_000212_340--Hb_000053_090 Hb_000212_340--Hb_000445_340 Hb_000212_340--Hb_003866_010 Hb_008014_080--Hb_072639_010 Hb_008014_080--Hb_000053_090 Hb_008014_080--Hb_000445_340 Hb_008014_080--Hb_003866_010 Hb_072639_010--Hb_000053_090 Hb_072639_010--Hb_000445_340 Hb_072639_010--Hb_003866_010 Hb_000053_090--Hb_000445_340 Hb_000053_090--Hb_003866_010 Hb_000445_340--Hb_003866_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0379959 0 0.0461347 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis