Hb_002659_110

Information

Type -
Description -
Location Contig2659: 123282-124952
Sequence    

Annotation

kegg
ID rcu:RCOM_1602070
description cinnamoyl-CoA reductase, putative (EC:1.1.1.219)
nr
ID XP_002510729.1
description cinnamoyl-CoA reductase, putative [Ricinus communis]
swissprot
ID P83775
description Putative NADPH-dependent methylglyoxal reductase GRP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRP2 PE=1 SV=2
trembl
ID B9R8T6
description Cinnamoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1602070 PE=4 SV=1
Gene Ontology
ID GO:0003824
description cinnamoyl- reductase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002659_110 0.0 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
2 Hb_004204_040 0.09448588 - - -
3 Hb_130739_010 0.1484589038 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
4 Hb_071079_060 0.1598148375 - - PREDICTED: uncharacterized protein LOC105113464 [Populus euphratica]
5 Hb_002965_180 0.160675688 - - AMSH-like ubiquitin thioesterase 3 [Morus notabilis]
6 Hb_087314_010 0.1646042278 - - -
7 Hb_048987_020 0.1669288519 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
8 Hb_002597_030 0.1709422191 - - -
9 Hb_072670_010 0.1746027976 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
10 Hb_004899_380 0.1752529489 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008406_050 0.1755980247 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 2 [Jatropha curcas]
12 Hb_057018_010 0.177801079 - - hypothetical protein JCGZ_04004 [Jatropha curcas]
13 Hb_008196_010 0.1778175994 - - unnamed protein product [Coffea canephora]
14 Hb_029576_070 0.1853995138 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
15 Hb_000628_060 0.1858403706 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
16 Hb_004474_020 0.1860227451 - - aldo-keto reductase, putative [Ricinus communis]
17 Hb_010926_020 0.1862838876 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
18 Hb_000373_260 0.1904390665 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
19 Hb_001810_050 0.1914936767 - - conserved hypothetical protein [Ricinus communis]
20 Hb_107495_060 0.192706197 - - Cell division protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002659_110 Hb_002659_110 Hb_004204_040 Hb_004204_040 Hb_002659_110--Hb_004204_040 Hb_130739_010 Hb_130739_010 Hb_002659_110--Hb_130739_010 Hb_071079_060 Hb_071079_060 Hb_002659_110--Hb_071079_060 Hb_002965_180 Hb_002965_180 Hb_002659_110--Hb_002965_180 Hb_087314_010 Hb_087314_010 Hb_002659_110--Hb_087314_010 Hb_048987_020 Hb_048987_020 Hb_002659_110--Hb_048987_020 Hb_001810_050 Hb_001810_050 Hb_004204_040--Hb_001810_050 Hb_004204_040--Hb_071079_060 Hb_010926_020 Hb_010926_020 Hb_004204_040--Hb_010926_020 Hb_052802_010 Hb_052802_010 Hb_004204_040--Hb_052802_010 Hb_057018_010 Hb_057018_010 Hb_004204_040--Hb_057018_010 Hb_143933_010 Hb_143933_010 Hb_130739_010--Hb_143933_010 Hb_130739_010--Hb_071079_060 Hb_130739_010--Hb_002965_180 Hb_020805_160 Hb_020805_160 Hb_130739_010--Hb_020805_160 Hb_158349_010 Hb_158349_010 Hb_130739_010--Hb_158349_010 Hb_071079_060--Hb_001810_050 Hb_012640_010 Hb_012640_010 Hb_071079_060--Hb_012640_010 Hb_071079_060--Hb_020805_160 Hb_002965_180--Hb_158349_010 Hb_002965_180--Hb_143933_010 Hb_002965_180--Hb_071079_060 Hb_053073_010 Hb_053073_010 Hb_002965_180--Hb_053073_010 Hb_087314_010--Hb_048987_020 Hb_107495_060 Hb_107495_060 Hb_087314_010--Hb_107495_060 Hb_072670_010 Hb_072670_010 Hb_087314_010--Hb_072670_010 Hb_180695_010 Hb_180695_010 Hb_087314_010--Hb_180695_010 Hb_006721_060 Hb_006721_060 Hb_087314_010--Hb_006721_060 Hb_029576_070 Hb_029576_070 Hb_087314_010--Hb_029576_070 Hb_004899_380 Hb_004899_380 Hb_048987_020--Hb_004899_380 Hb_004474_020 Hb_004474_020 Hb_048987_020--Hb_004474_020 Hb_034310_020 Hb_034310_020 Hb_048987_020--Hb_034310_020 Hb_003878_130 Hb_003878_130 Hb_048987_020--Hb_003878_130 Hb_048987_020--Hb_180695_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0237289 0.067479 0.0889645 0.318236 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0172306 0

CAGE analysis