Hb_002243_020

Information

Type -
Description -
Location Contig2243: 39778-46314
Sequence    

Annotation

kegg
ID rcu:RCOM_1762290
description hypothetical protein
nr
ID XP_012082176.1
description PREDICTED: uncharacterized protein LOC105642097 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19463 PE=4 SV=1
Gene Ontology
ID GO:0016772
description kinase superfamily protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23332: 42959-43211
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002243_020 0.0 - - PREDICTED: uncharacterized protein LOC105642097 isoform X1 [Jatropha curcas]
2 Hb_000866_060 0.1101043139 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
3 Hb_004920_020 0.1170563027 - - hypothetical protein POPTR_0014s11700g [Populus trichocarpa]
4 Hb_000239_050 0.1207438836 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
5 Hb_127263_010 0.1232708391 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
6 Hb_012807_030 0.1236458653 - - PREDICTED: uncharacterized protein LOC105628042 isoform X1 [Jatropha curcas]
7 Hb_000300_110 0.1245161094 - - hypothetical protein JCGZ_02651 [Jatropha curcas]
8 Hb_000128_040 0.1248778834 - - PREDICTED: uncharacterized protein LOC105641228 isoform X1 [Jatropha curcas]
9 Hb_015044_010 0.1250917575 - - hypothetical protein JCGZ_25130 [Jatropha curcas]
10 Hb_124677_010 0.1273435739 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004994_030 0.127970098 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
12 Hb_001014_240 0.1280737771 - - PREDICTED: protein NRT1/ PTR FAMILY 6.1 [Jatropha curcas]
13 Hb_137222_010 0.1298059686 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
14 Hb_003937_010 0.1300396246 - - hypothetical protein JCGZ_20930 [Jatropha curcas]
15 Hb_002762_050 0.1329246581 - - PREDICTED: uncharacterized protein LOC105640359 [Jatropha curcas]
16 Hb_012389_010 0.1330904364 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
17 Hb_001409_080 0.1338580133 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
18 Hb_005527_070 0.135216261 - - short-chain dehydrogenase/reductase family protein [Populus trichocarpa]
19 Hb_006267_040 0.1356955659 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
20 Hb_005211_080 0.1371790858 - - hypothetical protein POPTR_0010s13740g [Populus trichocarpa]

Gene co-expression network

sample Hb_002243_020 Hb_002243_020 Hb_000866_060 Hb_000866_060 Hb_002243_020--Hb_000866_060 Hb_004920_020 Hb_004920_020 Hb_002243_020--Hb_004920_020 Hb_000239_050 Hb_000239_050 Hb_002243_020--Hb_000239_050 Hb_127263_010 Hb_127263_010 Hb_002243_020--Hb_127263_010 Hb_012807_030 Hb_012807_030 Hb_002243_020--Hb_012807_030 Hb_000300_110 Hb_000300_110 Hb_002243_020--Hb_000300_110 Hb_006267_040 Hb_006267_040 Hb_000866_060--Hb_006267_040 Hb_000866_060--Hb_127263_010 Hb_000866_060--Hb_000239_050 Hb_015044_010 Hb_015044_010 Hb_000866_060--Hb_015044_010 Hb_001409_080 Hb_001409_080 Hb_000866_060--Hb_001409_080 Hb_000866_060--Hb_000300_110 Hb_000128_040 Hb_000128_040 Hb_004920_020--Hb_000128_040 Hb_000950_020 Hb_000950_020 Hb_004920_020--Hb_000950_020 Hb_005000_110 Hb_005000_110 Hb_004920_020--Hb_005000_110 Hb_000544_070 Hb_000544_070 Hb_004920_020--Hb_000544_070 Hb_005211_080 Hb_005211_080 Hb_004920_020--Hb_005211_080 Hb_004920_020--Hb_000300_110 Hb_000239_050--Hb_127263_010 Hb_000239_050--Hb_000300_110 Hb_000041_210 Hb_000041_210 Hb_000239_050--Hb_000041_210 Hb_007545_070 Hb_007545_070 Hb_000239_050--Hb_007545_070 Hb_000424_130 Hb_000424_130 Hb_000239_050--Hb_000424_130 Hb_127263_010--Hb_001409_080 Hb_127263_010--Hb_000300_110 Hb_127263_010--Hb_000424_130 Hb_029920_010 Hb_029920_010 Hb_127263_010--Hb_029920_010 Hb_002762_050 Hb_002762_050 Hb_012807_030--Hb_002762_050 Hb_124677_010 Hb_124677_010 Hb_012807_030--Hb_124677_010 Hb_000002_140 Hb_000002_140 Hb_012807_030--Hb_000002_140 Hb_000008_160 Hb_000008_160 Hb_012807_030--Hb_000008_160 Hb_012807_030--Hb_000866_060 Hb_012807_030--Hb_000128_040 Hb_000300_110--Hb_029920_010 Hb_000300_110--Hb_007545_070 Hb_000152_350 Hb_000152_350 Hb_000300_110--Hb_000152_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0326038 0.503633 0.159723 0 0.0259274
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0562032 0.559897

CAGE analysis