Hb_001014_220

Information

Type -
Description -
Location Contig1014: 174367-177936
Sequence    

Annotation

kegg
ID rcu:RCOM_1438490
description hypothetical protein
nr
ID XP_012087544.1
description PREDICTED: mediator-associated protein 2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24281 PE=4 SV=1
Gene Ontology
ID GO:0031981
description mediator-associated protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_220 0.0 - - PREDICTED: mediator-associated protein 2 [Jatropha curcas]
2 Hb_066807_010 0.1071362932 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
3 Hb_002681_140 0.1094488689 - - PREDICTED: surfeit locus protein 2 [Jatropha curcas]
4 Hb_004852_030 0.1112856395 - - PREDICTED: uncharacterized protein LOC105639923 [Jatropha curcas]
5 Hb_002391_110 0.1115958298 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
6 Hb_036034_010 0.1139529738 - - conserved hypothetical protein [Ricinus communis]
7 Hb_119583_010 0.1139851799 - - 60S ribosomal protein L12A [Hevea brasiliensis]
8 Hb_006637_060 0.1151888929 - - PREDICTED: uncharacterized protein LOC105649300 [Jatropha curcas]
9 Hb_000345_560 0.1155362305 - - -
10 Hb_000284_200 0.1219638424 - - -
11 Hb_000003_090 0.1221896944 - - -
12 Hb_005735_030 0.1228503893 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000084_310 0.1251818287 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
14 Hb_033642_020 0.1262965658 - - hypothetical protein JCGZ_19094 [Jatropha curcas]
15 Hb_002997_170 0.1267547421 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
16 Hb_004204_200 0.1282666196 - - PREDICTED: LYR motif-containing protein 4 [Jatropha curcas]
17 Hb_020902_010 0.1285050654 - - PREDICTED: uncharacterized protein LOC104595551 [Nelumbo nucifera]
18 Hb_001981_070 0.12879014 - - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative [Ricinus communis]
19 Hb_000365_360 0.1300309275 - - PREDICTED: RING finger and transmembrane domain-containing protein 2 isoform X1 [Jatropha curcas]
20 Hb_004993_010 0.1306420668 - - PREDICTED: uncharacterized protein LOC104889591 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_001014_220 Hb_001014_220 Hb_066807_010 Hb_066807_010 Hb_001014_220--Hb_066807_010 Hb_002681_140 Hb_002681_140 Hb_001014_220--Hb_002681_140 Hb_004852_030 Hb_004852_030 Hb_001014_220--Hb_004852_030 Hb_002391_110 Hb_002391_110 Hb_001014_220--Hb_002391_110 Hb_036034_010 Hb_036034_010 Hb_001014_220--Hb_036034_010 Hb_119583_010 Hb_119583_010 Hb_001014_220--Hb_119583_010 Hb_026048_100 Hb_026048_100 Hb_066807_010--Hb_026048_100 Hb_066807_010--Hb_002681_140 Hb_066807_010--Hb_004852_030 Hb_032531_030 Hb_032531_030 Hb_066807_010--Hb_032531_030 Hb_000365_360 Hb_000365_360 Hb_066807_010--Hb_000365_360 Hb_001902_050 Hb_001902_050 Hb_066807_010--Hb_001902_050 Hb_002681_140--Hb_002391_110 Hb_000176_140 Hb_000176_140 Hb_002681_140--Hb_000176_140 Hb_000284_200 Hb_000284_200 Hb_002681_140--Hb_000284_200 Hb_002044_090 Hb_002044_090 Hb_002681_140--Hb_002044_090 Hb_127979_010 Hb_127979_010 Hb_002681_140--Hb_127979_010 Hb_011496_010 Hb_011496_010 Hb_002681_140--Hb_011496_010 Hb_000803_150 Hb_000803_150 Hb_004852_030--Hb_000803_150 Hb_002007_270 Hb_002007_270 Hb_004852_030--Hb_002007_270 Hb_185467_020 Hb_185467_020 Hb_004852_030--Hb_185467_020 Hb_000165_030 Hb_000165_030 Hb_004852_030--Hb_000165_030 Hb_001981_070 Hb_001981_070 Hb_004852_030--Hb_001981_070 Hb_000599_120 Hb_000599_120 Hb_002391_110--Hb_000599_120 Hb_002391_110--Hb_127979_010 Hb_000085_340 Hb_000085_340 Hb_002391_110--Hb_000085_340 Hb_026048_090 Hb_026048_090 Hb_002391_110--Hb_026048_090 Hb_002391_110--Hb_000176_140 Hb_020902_010 Hb_020902_010 Hb_036034_010--Hb_020902_010 Hb_000077_050 Hb_000077_050 Hb_036034_010--Hb_000077_050 Hb_000307_200 Hb_000307_200 Hb_036034_010--Hb_000307_200 Hb_012286_050 Hb_012286_050 Hb_036034_010--Hb_012286_050 Hb_014568_030 Hb_014568_030 Hb_036034_010--Hb_014568_030 Hb_041091_010 Hb_041091_010 Hb_036034_010--Hb_041091_010 Hb_007632_250 Hb_007632_250 Hb_119583_010--Hb_007632_250 Hb_003633_130 Hb_003633_130 Hb_119583_010--Hb_003633_130 Hb_003106_130 Hb_003106_130 Hb_119583_010--Hb_003106_130 Hb_004502_030 Hb_004502_030 Hb_119583_010--Hb_004502_030 Hb_000847_070 Hb_000847_070 Hb_119583_010--Hb_000847_070 Hb_002997_170 Hb_002997_170 Hb_119583_010--Hb_002997_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.09758 0.373681 0.667712 0.571847 4.77232 7.75075
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.91557 3.78678 2.39557 0.933746 0.665564

CAGE analysis