Hb_000934_240

Information

Type -
Description -
Location Contig934: 221971-223275
Sequence    

Annotation

kegg
ID rcu:RCOM_0138860
description Peroxidase 43 precursor, putative (EC:1.11.1.7)
nr
ID XP_012066091.1
description PREDICTED: peroxidase 13 [Jatropha curcas]
swissprot
ID Q9SZH2
description Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=3 SV=2
trembl
ID B9SJK5
description Peroxidase OS=Ricinus communis GN=RCOM_0138860 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 43

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62943: 221925-223333
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000934_240 0.0 - - PREDICTED: peroxidase 13 [Jatropha curcas]
2 Hb_001500_080 0.1031913099 - - PREDICTED: uncharacterized protein LOC105647337 isoform X1 [Jatropha curcas]
3 Hb_000152_770 0.106017629 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
4 Hb_003592_060 0.120453436 - - hypothetical protein F383_11017 [Gossypium arboreum]
5 Hb_009693_010 0.1214768051 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Gossypium raimondii]
6 Hb_004446_060 0.1228485255 - - neutral/alkaline invertase [Manihot esculenta]
7 Hb_002851_070 0.1290707841 - - PREDICTED: uncharacterized protein LOC105646410 [Jatropha curcas]
8 Hb_006266_010 0.1301636634 - - unnamed protein product [Vitis vinifera]
9 Hb_000880_040 0.1348931099 - - -
10 Hb_001226_100 0.1402675464 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_007007_130 0.1440028247 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]
12 Hb_000866_040 0.1473521732 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
13 Hb_004832_010 0.1504472942 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008705_030 0.1516880488 - - hypothetical protein JCGZ_13017 [Jatropha curcas]
15 Hb_002217_060 0.1536078655 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
16 Hb_001437_260 0.1549555952 - - PREDICTED: protein FAM98B-like [Jatropha curcas]
17 Hb_001186_120 0.1558915365 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
18 Hb_006615_220 0.1568835768 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X2 [Jatropha curcas]
19 Hb_019570_010 0.1570183894 - - lyase, putative [Ricinus communis]
20 Hb_023771_030 0.1583098028 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000934_240 Hb_000934_240 Hb_001500_080 Hb_001500_080 Hb_000934_240--Hb_001500_080 Hb_000152_770 Hb_000152_770 Hb_000934_240--Hb_000152_770 Hb_003592_060 Hb_003592_060 Hb_000934_240--Hb_003592_060 Hb_009693_010 Hb_009693_010 Hb_000934_240--Hb_009693_010 Hb_004446_060 Hb_004446_060 Hb_000934_240--Hb_004446_060 Hb_002851_070 Hb_002851_070 Hb_000934_240--Hb_002851_070 Hb_001500_080--Hb_009693_010 Hb_000880_040 Hb_000880_040 Hb_001500_080--Hb_000880_040 Hb_000260_750 Hb_000260_750 Hb_001500_080--Hb_000260_750 Hb_004832_010 Hb_004832_010 Hb_001500_080--Hb_004832_010 Hb_001500_080--Hb_002851_070 Hb_007007_130 Hb_007007_130 Hb_000152_770--Hb_007007_130 Hb_000152_770--Hb_004446_060 Hb_000152_770--Hb_003592_060 Hb_001226_100 Hb_001226_100 Hb_000152_770--Hb_001226_100 Hb_000152_770--Hb_001500_080 Hb_006266_010 Hb_006266_010 Hb_003592_060--Hb_006266_010 Hb_005743_010 Hb_005743_010 Hb_003592_060--Hb_005743_010 Hb_068804_070 Hb_068804_070 Hb_003592_060--Hb_068804_070 Hb_003592_060--Hb_009693_010 Hb_002217_060 Hb_002217_060 Hb_003592_060--Hb_002217_060 Hb_000018_120 Hb_000018_120 Hb_003592_060--Hb_000018_120 Hb_009693_010--Hb_000880_040 Hb_009693_010--Hb_002851_070 Hb_009693_010--Hb_006266_010 Hb_000365_440 Hb_000365_440 Hb_009693_010--Hb_000365_440 Hb_002918_120 Hb_002918_120 Hb_004446_060--Hb_002918_120 Hb_001437_260 Hb_001437_260 Hb_004446_060--Hb_001437_260 Hb_004446_060--Hb_007007_130 Hb_004446_060--Hb_002851_070 Hb_021346_020 Hb_021346_020 Hb_004446_060--Hb_021346_020 Hb_004446_060--Hb_004832_010 Hb_023771_030 Hb_023771_030 Hb_002851_070--Hb_023771_030 Hb_002851_070--Hb_000880_040 Hb_000152_120 Hb_000152_120 Hb_002851_070--Hb_000152_120 Hb_002851_070--Hb_007007_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0207261 0.33544 3.6428 1.11462 0 0.0225143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0373033 0.137791 1.79792 1.68512

CAGE analysis