Hb_000836_180

Information

Type -
Description -
Location Contig836: 173207-176785
Sequence    

Annotation

kegg
ID rcu:RCOM_1616230
description ferric-chelate reductase, putative (EC:1.6.3.1)
nr
ID ADR70886.1
description ferric reductase oxidase [Manihot esculenta]
swissprot
ID P92949
description Ferric reduction oxidase 2 OS=Arabidopsis thaliana GN=FRO2 PE=1 SV=2
trembl
ID V9HYU6
description Ferric reductase oxidase OS=Manihot esculenta GN=FRO1 PE=2 SV=1
Gene Ontology
ID GO:0016021
description ferric reduction oxidase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_180 0.0 - - ferric reductase oxidase [Manihot esculenta]
2 Hb_112703_010 0.1127470611 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
3 Hb_179363_010 0.1296989008 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_008651_010 0.1405472693 - - cytochrome P450, putative [Ricinus communis]
5 Hb_002289_180 0.1476817071 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
6 Hb_000819_020 0.1485038593 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]
7 Hb_032071_010 0.1511042261 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
8 Hb_000433_050 0.1522284763 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
9 Hb_001515_040 0.1609037829 - - -
10 Hb_008725_220 0.1628699551 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
11 Hb_000025_490 0.1680730684 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
12 Hb_004899_010 0.17183648 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
13 Hb_005054_330 0.1725896172 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
14 Hb_101437_010 0.1732364469 - - PREDICTED: protein P21-like [Jatropha curcas]
15 Hb_000164_160 0.1738195799 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
16 Hb_000997_130 0.1756293159 - - DNA binding protein, putative [Ricinus communis]
17 Hb_009692_030 0.176607978 - - WRKY DNA-binding protein 70, putative isoform 2, partial [Theobroma cacao]
18 Hb_002897_020 0.177127891 - - phosphate transporter [Manihot esculenta]
19 Hb_167186_010 0.1794676878 - - cation-transporting atpase plant, putative [Ricinus communis]
20 Hb_010223_010 0.179532472 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000836_180 Hb_000836_180 Hb_112703_010 Hb_112703_010 Hb_000836_180--Hb_112703_010 Hb_179363_010 Hb_179363_010 Hb_000836_180--Hb_179363_010 Hb_008651_010 Hb_008651_010 Hb_000836_180--Hb_008651_010 Hb_002289_180 Hb_002289_180 Hb_000836_180--Hb_002289_180 Hb_000819_020 Hb_000819_020 Hb_000836_180--Hb_000819_020 Hb_032071_010 Hb_032071_010 Hb_000836_180--Hb_032071_010 Hb_112703_010--Hb_002289_180 Hb_112703_010--Hb_179363_010 Hb_112703_010--Hb_008651_010 Hb_112703_010--Hb_032071_010 Hb_000997_130 Hb_000997_130 Hb_112703_010--Hb_000997_130 Hb_000164_160 Hb_000164_160 Hb_112703_010--Hb_000164_160 Hb_179363_010--Hb_008651_010 Hb_000433_050 Hb_000433_050 Hb_179363_010--Hb_000433_050 Hb_179363_010--Hb_032071_010 Hb_179363_010--Hb_002289_180 Hb_001515_040 Hb_001515_040 Hb_179363_010--Hb_001515_040 Hb_008651_010--Hb_002289_180 Hb_008651_010--Hb_032071_010 Hb_010223_010 Hb_010223_010 Hb_008651_010--Hb_010223_010 Hb_008651_010--Hb_000433_050 Hb_002289_180--Hb_000997_130 Hb_002289_180--Hb_032071_010 Hb_099188_010 Hb_099188_010 Hb_002289_180--Hb_099188_010 Hb_008637_020 Hb_008637_020 Hb_002289_180--Hb_008637_020 Hb_164577_010 Hb_164577_010 Hb_000819_020--Hb_164577_010 Hb_000819_020--Hb_008637_020 Hb_000819_020--Hb_002289_180 Hb_000819_020--Hb_000164_160 Hb_000819_020--Hb_099188_010 Hb_000819_020--Hb_000997_130 Hb_001846_030 Hb_001846_030 Hb_032071_010--Hb_001846_030 Hb_032071_010--Hb_000997_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.173152 0.154064 0.0279055 0 0.0116783
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis