Hb_000768_090

Information

Type -
Description -
Location Contig768: 99088-106108
Sequence    

Annotation

kegg
ID rcu:RCOM_1515330
description utp-glucose-1-phosphate uridylyltransferase, putative (EC:2.7.7.9)
nr
ID XP_012070327.1
description PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Jatropha curcas]
swissprot
ID Q9SDX3
description UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1
trembl
ID B9SD97
description Utp-glucose-1-phosphate uridylyltransferase, putative OS=Ricinus communis GN=RCOM_1515330 PE=4 SV=1
Gene Ontology
ID GO:0005840
description utp--glucose-1-phosphate uridylyltransferase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57508: 99291-105979 , PASA_asmbl_57509: 103772-104149 , PASA_asmbl_57510: 104164-104483
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000768_090 0.0 - - PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Jatropha curcas]
2 Hb_000317_240 0.0600010077 - - PREDICTED: protein DYAD [Jatropha curcas]
3 Hb_000039_220 0.0612233307 - - PREDICTED: vesicle-associated protein 4-2-like [Gossypium raimondii]
4 Hb_000684_380 0.0622320806 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
5 Hb_000468_060 0.0690965024 - - ku P70 DNA helicase, putative [Ricinus communis]
6 Hb_005054_350 0.0700155045 - - PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
7 Hb_000215_110 0.0707756374 - - PREDICTED: uncharacterized protein C3F10.06c isoform X1 [Jatropha curcas]
8 Hb_000035_180 0.0712624067 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 [Jatropha curcas]
9 Hb_002530_030 0.072286706 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Jatropha curcas]
10 Hb_011344_210 0.0725593298 - - PREDICTED: probable calcium-binding protein CML13 [Jatropha curcas]
11 Hb_004058_030 0.0731340666 - - PREDICTED: stomatin-like protein 2, mitochondrial [Jatropha curcas]
12 Hb_000504_140 0.0751221727 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
13 Hb_001133_120 0.0752021816 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
14 Hb_000373_070 0.0756314688 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]
15 Hb_003304_020 0.0761507909 - - Polyadenylate-binding protein RBP47C [Glycine soja]
16 Hb_003226_140 0.0761736382 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
17 Hb_001012_010 0.0762366565 - - PREDICTED: XIAP-associated factor 1 [Jatropha curcas]
18 Hb_005539_280 0.0771892196 - - PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
19 Hb_058999_020 0.077233541 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
20 Hb_000580_180 0.0774579969 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000768_090 Hb_000768_090 Hb_000317_240 Hb_000317_240 Hb_000768_090--Hb_000317_240 Hb_000039_220 Hb_000039_220 Hb_000768_090--Hb_000039_220 Hb_000684_380 Hb_000684_380 Hb_000768_090--Hb_000684_380 Hb_000468_060 Hb_000468_060 Hb_000768_090--Hb_000468_060 Hb_005054_350 Hb_005054_350 Hb_000768_090--Hb_005054_350 Hb_000215_110 Hb_000215_110 Hb_000768_090--Hb_000215_110 Hb_002530_030 Hb_002530_030 Hb_000317_240--Hb_002530_030 Hb_000757_060 Hb_000757_060 Hb_000317_240--Hb_000757_060 Hb_000465_460 Hb_000465_460 Hb_000317_240--Hb_000465_460 Hb_058999_020 Hb_058999_020 Hb_000317_240--Hb_058999_020 Hb_000504_140 Hb_000504_140 Hb_000317_240--Hb_000504_140 Hb_001133_120 Hb_001133_120 Hb_000039_220--Hb_001133_120 Hb_002303_070 Hb_002303_070 Hb_000039_220--Hb_002303_070 Hb_000039_220--Hb_000317_240 Hb_002197_020 Hb_002197_020 Hb_000039_220--Hb_002197_020 Hb_001357_350 Hb_001357_350 Hb_000039_220--Hb_001357_350 Hb_024958_010 Hb_024958_010 Hb_000684_380--Hb_024958_010 Hb_000589_120 Hb_000589_120 Hb_000684_380--Hb_000589_120 Hb_004058_030 Hb_004058_030 Hb_000684_380--Hb_004058_030 Hb_001359_050 Hb_001359_050 Hb_000684_380--Hb_001359_050 Hb_000331_550 Hb_000331_550 Hb_000684_380--Hb_000331_550 Hb_000019_030 Hb_000019_030 Hb_000468_060--Hb_000019_030 Hb_003226_140 Hb_003226_140 Hb_000468_060--Hb_003226_140 Hb_001575_090 Hb_001575_090 Hb_000468_060--Hb_001575_090 Hb_000035_180 Hb_000035_180 Hb_000468_060--Hb_000035_180 Hb_000120_670 Hb_000120_670 Hb_000468_060--Hb_000120_670 Hb_000120_470 Hb_000120_470 Hb_005054_350--Hb_000120_470 Hb_003435_020 Hb_003435_020 Hb_005054_350--Hb_003435_020 Hb_001758_100 Hb_001758_100 Hb_005054_350--Hb_001758_100 Hb_000032_380 Hb_000032_380 Hb_005054_350--Hb_000032_380 Hb_002078_140 Hb_002078_140 Hb_005054_350--Hb_002078_140 Hb_000215_110--Hb_002303_070 Hb_000373_070 Hb_000373_070 Hb_000215_110--Hb_000373_070 Hb_000215_110--Hb_003226_140 Hb_001279_150 Hb_001279_150 Hb_000215_110--Hb_001279_150 Hb_000331_260 Hb_000331_260 Hb_000215_110--Hb_000331_260 Hb_000580_180 Hb_000580_180 Hb_000215_110--Hb_000580_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.8649 10.974 20.3017 14.027 15.7138 19.9476
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.136 25.7194 21.2519 17.457 8.98952

CAGE analysis