Hb_000219_070

Information

Type -
Description -
Location Contig219: 194726-195595
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000219_070 0.0 - - -
2 Hb_000922_440 0.1871016473 - - -
3 Hb_184629_010 0.2403815021 - - UDP-Glycosyltransferase superfamily protein isoform 1 [Theobroma cacao]
4 Hb_000493_020 0.266529559 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
5 Hb_063716_060 0.2681528674 - - conserved hypothetical protein [Ricinus communis]
6 Hb_040779_010 0.3010769193 - - -
7 Hb_006960_030 0.3166069573 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44-like [Jatropha curcas]
8 Hb_017387_030 0.3195273862 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
9 Hb_034667_020 0.3201894309 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000002_320 0.3248325651 - - PREDICTED: uncharacterized protein LOC105632108 [Jatropha curcas]
11 Hb_165078_010 0.3281849815 - - -
12 Hb_005883_040 0.3283129862 - - hypothetical protein JCGZ_11546 [Jatropha curcas]
13 Hb_134956_010 0.3288174083 - - PREDICTED: (S)-coclaurine N-methyltransferase [Jatropha curcas]
14 Hb_001711_070 0.328908736 - - -
15 Hb_006230_040 0.3362320272 - - kinase, putative [Ricinus communis]
16 Hb_171619_010 0.3370418006 - - protein binding protein, putative [Ricinus communis]
17 Hb_001439_030 0.3387851034 - - -
18 Hb_002249_110 0.341440853 - - PREDICTED: centromere protein S isoform X1 [Jatropha curcas]
19 Hb_002540_040 0.3423173638 - - BnaC05g39550D [Brassica napus]
20 Hb_070385_010 0.3428789962 - - PREDICTED: uncharacterized protein LOC103323653 [Prunus mume]

Gene co-expression network

sample Hb_000219_070 Hb_000219_070 Hb_000922_440 Hb_000922_440 Hb_000219_070--Hb_000922_440 Hb_184629_010 Hb_184629_010 Hb_000219_070--Hb_184629_010 Hb_000493_020 Hb_000493_020 Hb_000219_070--Hb_000493_020 Hb_063716_060 Hb_063716_060 Hb_000219_070--Hb_063716_060 Hb_040779_010 Hb_040779_010 Hb_000219_070--Hb_040779_010 Hb_006960_030 Hb_006960_030 Hb_000219_070--Hb_006960_030 Hb_000922_440--Hb_184629_010 Hb_059436_010 Hb_059436_010 Hb_000922_440--Hb_059436_010 Hb_000922_440--Hb_040779_010 Hb_000002_320 Hb_000002_320 Hb_000922_440--Hb_000002_320 Hb_034667_020 Hb_034667_020 Hb_000922_440--Hb_034667_020 Hb_184629_010--Hb_040779_010 Hb_184629_010--Hb_059436_010 Hb_000200_060 Hb_000200_060 Hb_184629_010--Hb_000200_060 Hb_184629_010--Hb_006960_030 Hb_001439_030 Hb_001439_030 Hb_000493_020--Hb_001439_030 Hb_002540_040 Hb_002540_040 Hb_000493_020--Hb_002540_040 Hb_131621_010 Hb_131621_010 Hb_000493_020--Hb_131621_010 Hb_007765_090 Hb_007765_090 Hb_000493_020--Hb_007765_090 Hb_043999_010 Hb_043999_010 Hb_000493_020--Hb_043999_010 Hb_063716_060--Hb_000002_320 Hb_063716_060--Hb_002540_040 Hb_000521_110 Hb_000521_110 Hb_063716_060--Hb_000521_110 Hb_011781_040 Hb_011781_040 Hb_063716_060--Hb_011781_040 Hb_063716_060--Hb_000922_440 Hb_000214_090 Hb_000214_090 Hb_040779_010--Hb_000214_090 Hb_040779_010--Hb_000200_060 Hb_028848_030 Hb_028848_030 Hb_040779_010--Hb_028848_030 Hb_012107_070 Hb_012107_070 Hb_040779_010--Hb_012107_070 Hb_000005_320 Hb_000005_320 Hb_006960_030--Hb_000005_320 Hb_008406_130 Hb_008406_130 Hb_006960_030--Hb_008406_130 Hb_061256_030 Hb_061256_030 Hb_006960_030--Hb_061256_030 Hb_003673_020 Hb_003673_020 Hb_006960_030--Hb_003673_020 Hb_101020_010 Hb_101020_010 Hb_006960_030--Hb_101020_010 Hb_000252_090 Hb_000252_090 Hb_006960_030--Hb_000252_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0577598 0 0.0737935 0 0.0427169 0.162226
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis