Hb_184629_010

Information

Type -
Description -
Location Contig184629: 3392-4893
Sequence    

Annotation

kegg
ID tcc:TCM_031873
description UDP-Glycosyltransferase superfamily protein isoform 1
nr
ID XP_007021799.1
description UDP-Glycosyltransferase superfamily protein isoform 1 [Theobroma cacao]
swissprot
ID Q755C1
description Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG2 PE=3 SV=1
trembl
ID A0A061FFS2
description UDP-Glycosyltransferase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_031873 PE=4 SV=1
Gene Ontology
ID GO:0004378
description alpha- -mannosyltransferase alg2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18085: 2823-4757
cDNA
(Sanger)
(ID:Location)		 010_N22.ab1: 2823-4757

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184629_010 0.0 - - UDP-Glycosyltransferase superfamily protein isoform 1 [Theobroma cacao]
2 Hb_000922_440 0.1755333053 - - -
3 Hb_040779_010 0.1934586094 - - -
4 Hb_059436_010 0.231867175 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
5 Hb_000200_060 0.2382864423 - - palmitoyl-acyl carrier thioesterase [Medicago truncatula]
6 Hb_000219_070 0.2403815021 - - -
7 Hb_006960_030 0.2513515728 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44-like [Jatropha curcas]
8 Hb_002759_130 0.2573494428 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005892_070 0.260700405 - - Ribosomal L11 methyltransferase [Gossypium arboreum]
10 Hb_000007_310 0.2625768156 - - hypothetical protein POPTR_0010s14370g [Populus trichocarpa]
11 Hb_000028_630 0.2744380985 - - PIN-like protein, partial [Selaginella apoda]
12 Hb_028848_030 0.2837593877 - - -
13 Hb_075570_010 0.2867089523 - - -
14 Hb_171554_020 0.2894029792 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
15 Hb_132629_010 0.289471247 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
16 Hb_177627_010 0.2962758913 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
17 Hb_003494_260 0.2997582115 - - -
18 Hb_022749_030 0.306764773 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
19 Hb_000153_040 0.3106809319 - - -
20 Hb_000345_480 0.311897815 - - cyclin-dependent protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_184629_010 Hb_184629_010 Hb_000922_440 Hb_000922_440 Hb_184629_010--Hb_000922_440 Hb_040779_010 Hb_040779_010 Hb_184629_010--Hb_040779_010 Hb_059436_010 Hb_059436_010 Hb_184629_010--Hb_059436_010 Hb_000200_060 Hb_000200_060 Hb_184629_010--Hb_000200_060 Hb_000219_070 Hb_000219_070 Hb_184629_010--Hb_000219_070 Hb_006960_030 Hb_006960_030 Hb_184629_010--Hb_006960_030 Hb_000922_440--Hb_000219_070 Hb_000922_440--Hb_059436_010 Hb_000922_440--Hb_040779_010 Hb_000002_320 Hb_000002_320 Hb_000922_440--Hb_000002_320 Hb_034667_020 Hb_034667_020 Hb_000922_440--Hb_034667_020 Hb_000214_090 Hb_000214_090 Hb_040779_010--Hb_000214_090 Hb_040779_010--Hb_000200_060 Hb_028848_030 Hb_028848_030 Hb_040779_010--Hb_028848_030 Hb_012107_070 Hb_012107_070 Hb_040779_010--Hb_012107_070 Hb_000028_630 Hb_000028_630 Hb_059436_010--Hb_000028_630 Hb_001178_120 Hb_001178_120 Hb_059436_010--Hb_001178_120 Hb_059436_010--Hb_040779_010 Hb_059436_010--Hb_028848_030 Hb_001741_100 Hb_001741_100 Hb_000200_060--Hb_001741_100 Hb_002234_220 Hb_002234_220 Hb_000200_060--Hb_002234_220 Hb_134732_010 Hb_134732_010 Hb_000200_060--Hb_134732_010 Hb_002124_020 Hb_002124_020 Hb_000200_060--Hb_002124_020 Hb_002217_130 Hb_002217_130 Hb_000200_060--Hb_002217_130 Hb_000007_310 Hb_000007_310 Hb_000200_060--Hb_000007_310 Hb_000493_020 Hb_000493_020 Hb_000219_070--Hb_000493_020 Hb_063716_060 Hb_063716_060 Hb_000219_070--Hb_063716_060 Hb_000219_070--Hb_040779_010 Hb_000219_070--Hb_006960_030 Hb_000005_320 Hb_000005_320 Hb_006960_030--Hb_000005_320 Hb_008406_130 Hb_008406_130 Hb_006960_030--Hb_008406_130 Hb_061256_030 Hb_061256_030 Hb_006960_030--Hb_061256_030 Hb_003673_020 Hb_003673_020 Hb_006960_030--Hb_003673_020 Hb_101020_010 Hb_101020_010 Hb_006960_030--Hb_101020_010 Hb_000252_090 Hb_000252_090 Hb_006960_030--Hb_000252_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.283237 0 0.145247 0 0.254337 0.255178
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis