Hb_000109_250

Information

Type -
Description -
Location Contig109: 351907-352411
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000109_250 0.0 - - -
2 Hb_000300_640 0.1124827548 - - PREDICTED: uncharacterized protein LOC100855285 [Vitis vinifera]
3 Hb_000987_070 0.1234065415 - - Inflorescence meristem receptor-like kinase 2 isoform 1 [Theobroma cacao]
4 Hb_000705_210 0.1275173948 - - PREDICTED: ras-related protein Rab2BV [Jatropha curcas]
5 Hb_015978_060 0.1294521631 - - unnamed protein product [Vitis vinifera]
6 Hb_002030_040 0.1313648483 - - hypothetical protein JCGZ_18677 [Jatropha curcas]
7 Hb_001366_190 0.1339604869 - - PREDICTED: uncharacterized protein LOC105632829 [Jatropha curcas]
8 Hb_000062_550 0.1356869498 - - PREDICTED: OTU domain-containing protein At3g57810-like isoform X1 [Jatropha curcas]
9 Hb_001143_170 0.1362451092 - - nucellin, putative [Ricinus communis]
10 Hb_001105_070 0.1367306498 - - PREDICTED: uncharacterized protein LOC105632829 [Jatropha curcas]
11 Hb_000049_120 0.1367948183 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
12 Hb_003057_100 0.1369727725 - - PREDICTED: LOW QUALITY PROTEIN: S-adenosylmethionine mitochondrial carrier protein-like [Malus domestica]
13 Hb_012053_070 0.1369817754 - - PREDICTED: uncharacterized protein LOC105637344 [Jatropha curcas]
14 Hb_000625_070 0.1390670789 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
15 Hb_029866_090 0.1419832219 - - PREDICTED: uncharacterized protein LOC105648377 [Jatropha curcas]
16 Hb_000331_450 0.1431347189 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas]
17 Hb_011310_190 0.1434162289 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
18 Hb_000692_220 0.143612663 - - hypothetical protein B456_002G120900 [Gossypium raimondii]
19 Hb_005941_040 0.1439177736 - - PREDICTED: CASP-like protein 5A2 [Jatropha curcas]
20 Hb_004705_100 0.1446935905 - - PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]

Gene co-expression network

sample Hb_000109_250 Hb_000109_250 Hb_000300_640 Hb_000300_640 Hb_000109_250--Hb_000300_640 Hb_000987_070 Hb_000987_070 Hb_000109_250--Hb_000987_070 Hb_000705_210 Hb_000705_210 Hb_000109_250--Hb_000705_210 Hb_015978_060 Hb_015978_060 Hb_000109_250--Hb_015978_060 Hb_002030_040 Hb_002030_040 Hb_000109_250--Hb_002030_040 Hb_001366_190 Hb_001366_190 Hb_000109_250--Hb_001366_190 Hb_000062_550 Hb_000062_550 Hb_000300_640--Hb_000062_550 Hb_000300_640--Hb_001366_190 Hb_000802_080 Hb_000802_080 Hb_000300_640--Hb_000802_080 Hb_002685_020 Hb_002685_020 Hb_000300_640--Hb_002685_020 Hb_000300_640--Hb_000705_210 Hb_000700_110 Hb_000700_110 Hb_000300_640--Hb_000700_110 Hb_001105_070 Hb_001105_070 Hb_000987_070--Hb_001105_070 Hb_065525_020 Hb_065525_020 Hb_000987_070--Hb_065525_020 Hb_000987_070--Hb_002030_040 Hb_000987_070--Hb_000705_210 Hb_000201_120 Hb_000201_120 Hb_000987_070--Hb_000201_120 Hb_030736_080 Hb_030736_080 Hb_000987_070--Hb_030736_080 Hb_000705_210--Hb_001105_070 Hb_029866_090 Hb_029866_090 Hb_000705_210--Hb_029866_090 Hb_012053_070 Hb_012053_070 Hb_000705_210--Hb_012053_070 Hb_000510_130 Hb_000510_130 Hb_000705_210--Hb_000510_130 Hb_005431_010 Hb_005431_010 Hb_000705_210--Hb_005431_010 Hb_000661_250 Hb_000661_250 Hb_015978_060--Hb_000661_250 Hb_005618_160 Hb_005618_160 Hb_015978_060--Hb_005618_160 Hb_001259_090 Hb_001259_090 Hb_015978_060--Hb_001259_090 Hb_000154_080 Hb_000154_080 Hb_015978_060--Hb_000154_080 Hb_000300_060 Hb_000300_060 Hb_015978_060--Hb_000300_060 Hb_000808_040 Hb_000808_040 Hb_015978_060--Hb_000808_040 Hb_009773_020 Hb_009773_020 Hb_002030_040--Hb_009773_020 Hb_000840_030 Hb_000840_030 Hb_002030_040--Hb_000840_030 Hb_004204_120 Hb_004204_120 Hb_002030_040--Hb_004204_120 Hb_002030_040--Hb_065525_020 Hb_002105_090 Hb_002105_090 Hb_002030_040--Hb_002105_090 Hb_004324_310 Hb_004324_310 Hb_002030_040--Hb_004324_310 Hb_000398_180 Hb_000398_180 Hb_001366_190--Hb_000398_180 Hb_001366_190--Hb_000802_080 Hb_007508_070 Hb_007508_070 Hb_001366_190--Hb_007508_070 Hb_028872_140 Hb_028872_140 Hb_001366_190--Hb_028872_140 Hb_001454_210 Hb_001454_210 Hb_001366_190--Hb_001454_210 Hb_005305_080 Hb_005305_080 Hb_001366_190--Hb_005305_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.66162 1.17214 0.312545 2.08533 2.38977 1.68999
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.74233 2.57265 2.00361 0.481228 0.940714

CAGE analysis